Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05651 and BL03979

See DNA alignment / Visit BSNT_05651 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:45
# Commandline: needle
#    -asequence pep-align/BSNT_05651___ywkE.1.5803.seq
#    -bsequence pep-align/BL03979___ywkE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05651___ywkE-BL03979___ywkE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05651___ywkE-BL03979___ywkE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05651___ywkE
# 2: BL03979___ywkE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     183/288 (63.5%)
# Similarity:   221/288 (76.7%)
# Gaps:           0/288 ( 0.0%)
# Score: 923.0
# 
#
#=======================================

BSNT_05651___      1 MKTIFEALKWASSYLTEAGREENAAELLLLYDTGMERSKLLASLQEPIGE     50
                     ||||||||:|||||||||||:.||||:||.....::|||||||..:.|.|
BL03979___ywk      1 MKTIFEALRWASSYLTEAGRDRNAAEILLTDQLNIDRSKLLASFHDVISE     50

BSNT_05651___     51 DELYRFKRHVEMHKEGVPVQYIIGKEFFYGREFMVNDDVLIPRPETEEVV    100
                     .:..|||:.||:|.:|||||||.|||.||||||.||:.||||||||||||
BL03979___ywk     51 SDFARFKKSVELHHQGVPVQYITGKESFYGREFSVNEHVLIPRPETEEVV    100

BSNT_05651___    101 FHLLEKYRSVFSEDGKLEVVDVGTGSGAIAVTLALENQSFSVSAVDISKE    150
                     ..:|.:...||....:|:.|||||||||||||||||:..|||:|.|||::
BL03979___ywk    101 EAVLSEAERVFHGTDRLKAVDVGTGSGAIAVTLALESPRFSVTATDISEQ    150

BSNT_05651___    151 ALQVASANAEKLGANVRFYQGDLLEPFIKAGKKADIIVSNPPYISEEEMA    200
                     ||..|..||::|||.|.|..||||||.|...||||:|||||||||||:|.
BL03979___ywk    151 ALSTARHNADRLGAKVDFLCGDLLEPLIARQKKADVIVSNPPYISEEDMR    200

BSNT_05651___    201 DLSEIVRFHEPLHALTDGGDGLKFYKRFMEDIPLVMKDKVFVVFEIGWKQ    250
                     .||::||.|||..|||||.|||:||||||::||.|:.|:..|||||||.|
BL03979___ywk    201 TLSDVVRLHEPAGALTDGADGLQFYKRFMKEIPSVIADQALVVFEIGWTQ    250

BSNT_05651___    251 GAAVKDLILKAFKGAEVEVLKDINGKDRTICALIHKNK    288
                     |.||||:..:.|..|:|.|.||:|||||.:||:|.::.
BL03979___ywk    251 GNAVKDMFHRFFPDADVRVKKDLNGKDRIVCAVIEQHS    288


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