Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05652 and BL03978
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:45
# Commandline: needle
# -asequence pep-align/BSNT_05652___prfA.1.5803.seq
# -bsequence pep-align/BL03978___prfA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05652___prfA-BL03978___prfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05652___prfA-BL03978___prfA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05652___prfA
# 2: BL03978___prfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 356
# Identity: 331/356 (93.0%)
# Similarity: 351/356 (98.6%)
# Gaps: 0/356 ( 0.0%)
# Score: 1701.0
#
#
#=======================================
BSNT_05652___ 1 MLDRLKSIEERYEKLNELLSDPEVVNDPKKLREYSKEQSDIQETVDVYRQ 50
|||||||||:||||||||||||||||||||||||||||||:||||:|||:
BL03978___prf 1 MLDRLKSIEDRYEKLNELLSDPEVVNDPKKLREYSKEQSDLQETVEVYRR 50
BSNT_05652___ 51 YRDASEQLADAKAMLEEKLDAEMRDMVKEEISELQKETETLSERLKVLLI 100
||.|||||:|||||||||||::||:||||||||||:|.|:|:::||||||
BL03978___prf 51 YRSASEQLSDAKAMLEEKLDSDMREMVKEEISELQEEIESLTDQLKVLLI 100
BSNT_05652___ 101 PKDPNDDKNVIMEIRGAAGGEEAALFAGNLYRMYSRYAELQGWKTEVMEA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BL03978___prf 101 PKDPNDDKNVIMEIRGAAGGEEAALFAGNLYRMYSRYAELQGWKTEVMEA 150
BSNT_05652___ 151 NVTGTGGYKEIIFMITGSGAYSKLKYENGAHRVQRVPETESGGRIHTSTA 200
|:|||||||||||||.|:||||:|||||||||||||||||||||||||||
BL03978___prf 151 NMTGTGGYKEIIFMINGNGAYSRLKYENGAHRVQRVPETESGGRIHTSTA 200
BSNT_05652___ 201 TVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHLPTG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BL03978___prf 201 TVACLPEAEEVEVDIHEKDIRVDTFASSGPGGQSVNTTMSAVRLTHLPTG 250
BSNT_05652___ 251 VVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQTRKSAVGSGD 300
||||||||||||||||||||||||||||||||||||||||.||||||:||
BL03978___prf 251 VVVSCQDEKSQIKNKEKAMKVLRARIYDKFQQEAQAEYDQNRKSAVGTGD 300
BSNT_05652___ 301 RSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVVEALIVEDQASK 350
||||||||||||||||||||||||||||||||||||||::||||||||||
BL03978___prf 301 RSERIRTYNFPQNRVTDHRIGLTIQKLDQILEGKLDEVIDALIVEDQASK 350
BSNT_05652___ 351 LQQSEG 356
|||:|.
BL03978___prf 351 LQQAES 356
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