Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05655 and BL03977
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:46
# Commandline: needle
# -asequence pep-align/BSNT_05655___ywkB.1.5803.seq
# -bsequence pep-align/BL03977___ywkB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05655___ywkB-BL03977___ywkB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05655___ywkB-BL03977___ywkB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05655___ywkB
# 2: BL03977___ywkB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 319
# Identity: 248/319 (77.7%)
# Similarity: 282/319 (88.4%)
# Gaps: 1/319 ( 0.3%)
# Score: 1243.0
#
#
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BSNT_05655___ 1 MSILDILILLAPIFFVIVLGWFAGHFGSYDAKSAKGVSTLVTKYALPAHF 50
||.|:||||||||||||.||||||||||||||||||||||||||||||||
BL03977___ywk 1 MSFLNILILLAPIFFVIALGWFAGHFGSYDAKSAKGVSTLVTKYALPAHF 50
BSNT_05655___ 51 IAGILTTSRSEFLSQVPLMISLIIGIVGFYIIILLVCRFIFKYDLTNSSV 100
::.||:|.:.:|.||:||||||:|||||||:||||:.||:||||||::|:
BL03977___ywk 51 VSSILSTPKDKFYSQIPLMISLVIGIVGFYVIILLLLRFLFKYDLTDASM 100
BSNT_05655___ 101 FSLNSAQPTFAFMGIPVLGSLFGANEVAIPIAVTGIVVNAILDPLAIIIA 150
|||||||||||||||||||||||..|||||||:|||||||:|||||||:.
BL03977___ywk 101 FSLNSAQPTFAFMGIPVLGSLFGMQEVAIPIAITGIVVNAMLDPLAIIVG 150
BSNT_05655___ 151 TVGESSKKNEESGDSFWKMTGKSILHGLCEPLAAAPLISMILVLVFNFTL 200
|||.||||..|:.||.||:|||||||||.||||.|||.|:|||| |...:
BL03977___ywk 151 TVGRSSKKQTETTDSIWKVTGKSILHGLSEPLAFAPLASIILVL-FGLQI 199
BSNT_05655___ 201 PELGVKMLDQLGSTTSGVALFAVGVTVGIRKIKLSMPAIGIALLKVAVQP 250
|||..||||.||.||||:|||||||||||||||.||||:.|||||||.||
BL03977___ywk 200 PELPQKMLDMLGDTTSGIALFAVGVTVGIRKIKFSMPALSIALLKVAAQP 249
BSNT_05655___ 251 ALMFLIALAIGLPADQTTKAILLVAFPGSAVAAMIATRFEKQEEETATAF 300
||||:||:.:||.:...|||:||||||||||||||||.||.||.|||:||
BL03977___ywk 250 ALMFVIAMVVGLSSADMTKAVLLVAFPGSAVAAMIATNFESQEAETASAF 299
BSNT_05655___ 301 VVSAILSLISLPIIIALTA 319
|:||:||:|||||:||:||
BL03977___ywk 300 VISAVLSIISLPILIAITA 318
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