Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05658 and BL03975
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:46
# Commandline: needle
# -asequence pep-align/BSNT_05658___tdk.1.5803.seq
# -bsequence pep-align/BL03975___tdk.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05658___tdk-BL03975___tdk.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05658___tdk-BL03975___tdk.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05658___tdk
# 2: BL03975___tdk
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 195
# Identity: 158/195 (81.0%)
# Similarity: 179/195 (91.8%)
# Gaps: 1/195 ( 0.5%)
# Score: 836.0
#
#
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BSNT_05658___ 1 MYIMKQSGWLELICGSMFSGKSEELIRRVKRATYAKQEVRVFKPVIDNRY 50
||||||||||||||||||||||||||||:||||:|||||:||||.|||||
BL03975___tdk 1 MYIMKQSGWLELICGSMFSGKSEELIRRIKRATFAKQEVKVFKPAIDNRY 50
BSNT_05658___ 51 SEAAVVSHNGTSMTSYAISSAADIWDHISESTDVIAVDEVQFFDQEIVEV 100
|..:||||||||:..:||:|..:|:.:||:.||||.||||||||:.||..
BL03975___tdk 51 SSESVVSHNGTSIVCHAIASPEEIFQYISKETDVIGVDEVQFFDETIVGT 100
BSNT_05658___ 101 LSSLADKGYRVIAAGLDMDFRGEPFGVVPNIMAIAESVTKLQAVCSVCGS 150
|:||||:||||||||||:|||||||||||::||:||:|||||||||||||
BL03975___tdk 101 LTSLADQGYRVIAAGLDLDFRGEPFGVVPDLMALAETVTKLQAVCSVCGS 150
BSNT_05658___ 151 PASRTQRLIDGKPASYDDPVILVGASESYEARCRHHHEVPGKSKK 195
|||||||||:|||||||||||||||||:|||||||||||||..|
BL03975___tdk 151 PASRTQRLINGKPASYDDPVILVGASEAYEARCRHHHEVPGNPK- 194
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