Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05658 and BL03975
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:46
# Commandline: needle
# -asequence dna-align/BSNT_05658___tdk.1.5803.seq
# -bsequence dna-align/BL03975___tdk.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05658___tdk-BL03975___tdk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05658___tdk-BL03975___tdk.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05658___tdk
# 2: BL03975___tdk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 598
# Identity: 449/598 (75.1%)
# Similarity: 449/598 (75.1%)
# Gaps: 23/598 ( 3.8%)
# Score: 1636.0
#
#
#=======================================
BSNT_05658___ 1 ATGTACATAATGAAACAAAGCGGGTGGCTTGAGCTGATTTGCGGCAGCAT 50
||||||||.|||||.||||||||.||||||||.||.||.|||||.|||||
BL03975___tdk 1 ATGTACATCATGAAGCAAAGCGGCTGGCTTGAACTCATATGCGGAAGCAT 50
BSNT_05658___ 51 GTTCTCGGGGAAATCTGAAGAGCTGATCAGAAGAGTGAAGAGAGCAACTT 100
|||.|||||.|||||.||.|||||.|||.|..|..|.||.||.||.||.|
BL03975___tdk 51 GTTTTCGGGCAAATCAGAGGAGCTCATCCGCCGGATCAAAAGGGCGACGT 100
BSNT_05658___ 101 ATGCCAAGCAGGAAGTCAGGGTATTTAAGCCTGTAATTGATAACCGATA- 149
.|||.|||||||||||||..||.|||||.||.|..||||||||.||.||
BL03975___tdk 101 TTGCGAAGCAGGAAGTCAAAGTGTTTAAACCAGCCATTGATAATCGCTAC 150
BSNT_05658___ 150 --CAGCGAAGCTGCTGTTGTCTCCCATAATGGAACATCGATGACGAGCTA 197
||||||| .|.|||||.||.||||||||.|||||.||...|.||.|
BL03975___tdk 151 AGCAGCGAA---TCGGTTGTATCGCATAATGGGACATCCATTGTGTGCCA 197
BSNT_05658___ 198 TGCCATTTCGTCTGCTGCGGACATTTGGGATCACATCAGTGAAAG-TACA 246
||||||..|.|||.|.|..||.||||...|..||||.|| .|||| .||.
BL03975___tdk 198 TGCCATCGCATCTCCGGAAGAAATTTTTCAATACATAAG-CAAAGAAACG 246
BSNT_05658___ 247 GATGTGATTGCGGTTGATGAAGTGCAGTTTTTTGATCAGGAA---ATTGT 293
|||||.||.|..||.||||||||||||||||||| |.||| |||||
BL03975___tdk 247 GATGTCATCGGCGTCGATGAAGTGCAGTTTTTTG---ACGAAACGATTGT 293
BSNT_05658___ 294 TG--AGGTTTTATCATCTCTTGCCGATAAAGGCTACCGTGTGATAGCAGC 341
.| |.| |||.|.|||||.||.|||.|.||||||||||||||.|||||
BL03975___tdk 294 CGGCACG--TTAACTTCTCTGGCTGATCAGGGCTACCGTGTGATTGCAGC 341
BSNT_05658___ 342 AGGCCTTGATATGGATTTTAGGGGAGAGCCGTTCGGTGTCGT-CCCGAAT 390
||||||||||.|||||||..||||.|||||.|||||.||||| |||| ||
BL03975___tdk 342 AGGCCTTGATTTGGATTTCCGGGGCGAGCCTTTCGGCGTCGTGCCCG-AT 390
BSNT_05658___ 391 ATCATGGCGATTGCGGAAAGTGTGACAAAGCTGCAAGCCGTCTGTTCTGT 440
.|.|||||..|.|||||||..|||||.||||||||||||||.||.|||||
BL03975___tdk 391 CTGATGGCTTTAGCGGAAACGGTGACCAAGCTGCAAGCCGTGTGCTCTGT 440
BSNT_05658___ 441 TTGCGGATCACCGGCGAGCAGAACACAGCGCCTCATTGACGGCAAACCTG 490
.||||||||.||.||.|||.|.||.|||.|.||.||..|.||.|||||||
BL03975___tdk 441 CTGCGGATCTCCAGCCAGCCGCACGCAGAGGCTGATCAATGGAAAACCTG 490
BSNT_05658___ 491 CTTCTTACGATGATCCGGTCATTTTGGTTGGTGCATCTGAATCATATGAA 540
|||||||.||.||||||||||||||||||||.||.||.|||.||||||||
BL03975___tdk 491 CTTCTTATGACGATCCGGTCATTTTGGTTGGGGCCTCCGAAGCATATGAA 540
BSNT_05658___ 541 GCAAGATGCAGACATCATCACGAAGTCCCAGGAAAATCTAAAAAATAG 588
||..|.|||.|.||.|||||.|||||.||.|||||..|.|||..|
BL03975___tdk 541 GCGCGCTGCCGCCACCATCATGAAGTGCCTGGAAACCCGAAATGA--- 585
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