Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05673 and BL03968

See DNA alignment / Visit BSNT_05673 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:47
# Commandline: needle
#    -asequence pep-align/BSNT_05673___spo0F.1.5803.seq
#    -bsequence pep-align/BL03968___spo0F.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05673___spo0F-BL03968___spo0F.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05673___spo0F-BL03968___spo0F.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05673___spo0F
# 2: BL03968___spo0F
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 125
# Identity:     113/125 (90.4%)
# Similarity:   119/125 (95.2%)
# Gaps:           2/125 ( 1.6%)
# Score: 581.0
# 
#
#=======================================

BSNT_05673___      1 MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDL     50
                      |||||||||||||||:|||||||||||:|||||||:||||||..:||||
BL03968___spo      1 -MNEKILIVDDQYGIRVLLNEVFNKEGYKTFQAANGIQALDIVKNQRPDL     49

BSNT_05673___     51 VLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALT    100
                     ||||||||||||||||||||:|||.|||||||||||||||||||||||||
BL03968___spo     50 VLLDMKIPGMDGIEILKRMKIIDEGIRVIIMTAYGELDMIQESKELGALT     99

BSNT_05673___    101 HFAKPFDIDEIRDAVKKYLPLKSN-    124
                     ||||||||||||||||.|||:||| 
BL03968___spo    100 HFAKPFDIDEIRDAVKTYLPIKSNG    124


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.