Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05673 and BL03968
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:47
# Commandline: needle
# -asequence dna-align/BSNT_05673___spo0F.1.5803.seq
# -bsequence dna-align/BL03968___spo0F.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05673___spo0F-BL03968___spo0F.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05673___spo0F-BL03968___spo0F.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05673___spo0F
# 2: BL03968___spo0F
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 378
# Identity: 306/378 (81.0%)
# Similarity: 306/378 (81.0%)
# Gaps: 6/378 ( 1.6%)
# Score: 1266.0
#
#
#=======================================
BSNT_05673___ 1 ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTAT 50
||||||||.||.|||||||||||.||.||.||.|||||.|||||..|
BL03968___spo 1 ---ATGAATGAGAAGATTTTAATCGTAGACGACCAGTACGGGATTCGGGT 47
BSNT_05673___ 51 TTTGCTAAATGAAGTGTTCAATAAAGAAGGCTACCAGACGTTTCAGGCTG 100
|.||||.||||||||.||||||||||||||.|||.|.||.||.|||||.|
BL03968___spo 48 TCTGCTGAATGAAGTTTTCAATAAAGAAGGGTACAAAACCTTCCAGGCCG 97
BSNT_05673___ 101 CGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTT 150
|.|||||..|.||.||||||||||||||||.|||..|.||.||||||||.
BL03968___spo 98 CAAACGGGATTCAAGCGCTTGACATTGTGAAAAACCAGCGCCCCGACCTC 147
BSNT_05673___ 151 GTGCTTTTGGACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAA 200
||.||..|.||.||||||||.|||||.|||||||||||.|||||.|||||
BL03968___spo 148 GTTCTGCTCGATATGAAAATCCCCGGAATGGACGGAATTGAAATTTTAAA 197
BSNT_05673___ 201 ACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATCATGACGGCAT 250
|.|.||||||.||||.|||||....|||||.|||||.|||||||||||.|
BL03968___spo 198 AAGAATGAAGATCATAGACGAGGGGATCCGCGTCATCATCATGACGGCCT 247
BSNT_05673___ 251 ACGGAGAGCTCGACATGATCCAAGAATCGAAGGAATTGGGCGCCCTGACG 300
||||||||||||||||||||||.|||||||||||..|.||.||||||||.
BL03968___spo 248 ACGGAGAGCTCGACATGATCCAGGAATCGAAGGAGCTCGGAGCCCTGACA 297
BSNT_05673___ 301 CACTTTGCCAAGCCGTTTGACATCGACGAAATCAGAGACGCCGTCAAAAA 350
||||||||.|||||.||||||||||||||||||.|.||.||||||||||.
BL03968___spo 298 CACTTTGCTAAGCCTTTTGACATCGACGAAATCCGCGATGCCGTCAAAAC 347
BSNT_05673___ 351 ATATCTGCCCCTGAAGTCTAACTGA--- 375
.|||||||||.|.|||||.|||.||
BL03968___spo 348 GTATCTGCCCATAAAGTCCAACGGATAG 375
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