Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05682 and BL03965
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:48
# Commandline: needle
# -asequence pep-align/BSNT_05682___ywjE.1.5803.seq
# -bsequence pep-align/BL03965___ywjE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05682___ywjE-BL03965___ywjE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05682___ywjE-BL03965___ywjE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05682___ywjE
# 2: BL03965___ywjE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity: 224/399 (56.1%)
# Similarity: 295/399 (73.9%)
# Gaps: 4/399 ( 1.0%)
# Score: 1204.0
#
#
#=======================================
BSNT_05682___ 1 MKVFIVIMIIVVIFFALILLDIFMGRAGYRKKAYEPVFSKKKSDIELIHC 50
.:.:||:|.....|:.||...||..:.|||||||||:|||||||||.
BL03965___ywj 1 ---MVPLMIMVCFLILLLALDFHFGRKAFEKKAYEPVFSEKKSDIELIHN 47
BSNT_05682___ 51 GADLVERMMKDIRQAASSVHMMFFIMKNDEVSHNMYTLLKTKAQAGVSVY 100
|.||.||::.|||||.||||:||:|:|||::|.....:||.||::||.|.
BL03965___ywj 48 GEDLCERLLDDIRQAESSVHVMFYIVKNDDISLEFLKVLKDKAKSGVCVR 97
BSNT_05682___ 101 LLLDWAGCRAIKKTALQTMKNAGVHVHVMNRPRFPFFFFHMQKRNHRKIT 150
||:|..|...:||..|..:|.:||||...|:|.||:||:.:..||||||.
BL03965___ywj 98 LLIDRIGAMKVKKKTLSGLKQSGVHVFFANKPGFPYFFYRLNARNHRKIA 147
BSNT_05682___ 151 VIDGKIGYIGGFNIAEEYLGKKAKFGNWEDYHLRMMGEGVHDLQTLFASD 200
||||||||:||||||:|||||||:||.|:||||||.||||.|||.:|.||
BL03965___ywj 148 VIDGKIGYVGGFNIAKEYLGKKAEFGPWKDYHLRMTGEGVADLQHIFISD 197
BSNT_05682___ 201 LKRNT-GIELGSDVWPKLQQGAISHKIYATDGYSLENIYLANIAQAKNRL 249
.||.. ..:..:.|:|.|||||::|..:||.|:|||..|::.|.|||.|:
BL03965___ywj 198 FKREAPQAKPANSVFPPLQQGAVTHTTHATKGFSLEEKYISFIEQAKERI 247
BSNT_05682___ 250 TVCTPYYIPSKPLQEALINARKNGVSVRIIVPMKSDHPLVREAAFTYYSE 299
.:||||||||..||:|:::||:.||.|.::||||.|||||:|||:|::..
BL03965___ywj 248 MICTPYYIPSPALQQAVLSARERGVIVSVLVPMKPDHPLVKEAAYTHFPA 297
BSNT_05682___ 300 LLDAGCLIYRYYQGFYHVKALIIDDHLSIIGTANFDKRSLFLNEEVNVEI 349
||.|||.|||||:||||.||||:||...:|||:|||.||||||:||||.|
BL03965___ywj 298 LLKAGCYIYRYYRGFYHAKALIVDDRHVMIGTSNFDNRSLFLNDEVNVVI 347
BSNT_05682___ 350 DDEAFTSEVYATIEEDMKKSERLTMEDFSKRTFRQRPAEWLGRALSYFL 398
.|:.:|.:.:..::|.::.:|.||.|.::||...|||.|||.:::|:||
BL03965___ywj 348 HDKDWTKQFFDVVKESIEHAELLTKERYAKRPVMQRPVEWLAKSISFFL 396
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