Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05685 and BL03964

See DNA alignment / Visit BSNT_05685 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:48
# Commandline: needle
#    -asequence pep-align/BSNT_05685.1.5803.seq
#    -bsequence pep-align/BL03964___ywjC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05685-BL03964___ywjC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05685-BL03964___ywjC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05685
# 2: BL03964___ywjC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 90
# Identity:      34/90 (37.8%)
# Similarity:    48/90 (53.3%)
# Gaps:          26/90 (28.9%)
# Score: 183.0
# 
#
#=======================================

BSNT_05685         1 ------------------------MCHSGSHEVYIYSKKTMCKIKSLIEL     26
                                             :|.|..|::||.|:|||||||.||||
BL03964___ywj      1 MNQAESIKLRAQSMTLKNLIELYKLCRSARHQLYICSRKTMCKIKDLIEL     50

BSNT_05685        27 ETFRMAHNEKEYLIVVEGTKASQLIEKFQNLIEPAEREAL     66
                     |.||||:.|.|.|||:||..|.:|::|.|:::..|:.:  
BL03964___ywj     51 EMFRMANRENECLIVIEGKMAQELVKKAQSILSDAQVQ--     88


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