Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05756 and BL03960

See DNA alignment / Visit BSNT_05756 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:51
# Commandline: needle
#    -asequence pep-align/BSNT_05756___rsfA.1.5803.seq
#    -bsequence pep-align/BL03960___rsfA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05756___rsfA-BL03960___rsfA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05756___rsfA-BL03960___rsfA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05756___rsfA
# 2: BL03960___rsfA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     207/270 (76.7%)
# Similarity:   226/270 (83.7%)
# Gaps:          21/270 ( 7.8%)
# Score: 1026.0
# 
#
#=======================================

BSNT_05756___      1 MTKQRQDAWSEENDLLLAETVLRHVREGSTQLNAFEEVGDKLNRTSAACG     50
                      .||||||||||||||||||||||||||||||||||||||:|||||||||
BL03960___rsf      1 -MKQRQDAWSEENDLLLAETVLRHVREGSTQLNAFEEVGDRLNRTSAACG     49

BSNT_05756___     51 FRWNAVVRHQYEKALQLAKKQRKQRMRALGNGQPAKKRLLYQPPAVDPEI    100
                     |||||||||||||||||||||||||||||||||||||||||:||.     
BL03960___rsf     50 FRWNAVVRHQYEKALQLAKKQRKQRMRALGNGQPAKKRLLYKPPV-----     94

BSNT_05756___    101 IQETAAEEPV------KTETPSVENEQPLMSGEHMPFVDESFKEELASLS    144
                       ||.||.|.      |..|.....:||:.| ||:|:|||||||||||||
BL03960___rsf     95 --ETNAEPPAESVVEQKKATADSSEQQPIAS-EHLPYVDESFKEELASLS    141

BSNT_05756___    145 HLLSPQTPAA------APEMTMNDVIRFLQNYEGNNEQSSALKMENERLK    188
                     |||||..|.|      :.:||::|||||||||.||.||::||||||||||
BL03960___rsf    142 HLLSPNQPQAGHTADTSKDMTIDDVIRFLQNYTGNEEQTAALKMENERLK    191

BSNT_05756___    189 KENQELQNKTEQLEAEVQKLEKDQKTIQEDYETLVKIMNRARKLVLFEED    238
                     :||:||..|.|:|||||:||||||.|||||||||||||||||||||||||
BL03960___rsf    192 QENEELTKKVEKLEAEVKKLEKDQTTIQEDYETLVKIMNRARKLVLFEED    241

BSNT_05756___    239 EHASPSFKMDRNGNLEKLAE    258
                     |||:|:|||||||||||:||
BL03960___rsf    242 EHAAPAFKMDRNGNLEKMAE    261


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