Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02045 and BL03959

See DNA alignment / Visit BSNT_02045 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:32
# Commandline: needle
#    -asequence pep-align/BSNT_02045___yjdJ.1.5803.seq
#    -bsequence pep-align/BL03959___yjdJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02045___yjdJ-BL03959___yjdJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02045___yjdJ-BL03959___yjdJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02045___yjdJ
# 2: BL03959___yjdJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:      45/110 (40.9%)
# Similarity:    65/110 (59.1%)
# Gaps:           2/110 ( 1.8%)
# Score: 216.0
# 
#
#=======================================

BSNT_02045___      1 MKGIFLVVQLGFSIMVFLFLAAVNWYQGSELVSDRFDWNYTAKLSKLLNG     50
                     ||.:...||.|.:.::|||.|..:|||||||:...::|.||||.:..|.|
BL03959___yjd      1 MKFVLYAVQFGTAALLFLFSALASWYQGSELLKVPWEWKYTAKFTSWLYG     50

BSNT_02045___     51 IDAVSSPKQISQLDFFIYSAKYYPVMSALMIISFLYVLA-ALFLLIYSVK     99
                     .|::.:...|||||||:|:||:.|....||.:|..|::| |.:|||.:..
BL03959___yjd     51 EDSIKNAHNISQLDFFVYAAKHTPATVILMAVSLAYIIALAAYLLIKTYV    100

BSNT_02045___    100 CNKQEIHLDC    109
                     ..|...... 
BL03959___yjd    101 KRKSASSAA-    109


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