Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05812 and BL03952
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:53
# Commandline: needle
# -asequence pep-align/BSNT_05812___ywdH.1.5803.seq
# -bsequence pep-align/BL03952___ywdH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05812___ywdH-BL03952___ywdH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05812___ywdH-BL03952___ywdH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05812___ywdH
# 2: BL03952___ywdH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 460
# Identity: 294/460 (63.9%)
# Similarity: 372/460 (80.9%)
# Gaps: 4/460 ( 0.9%)
# Score: 1587.0
#
#
#=======================================
BSNT_05812___ 1 ----MNSIPSIISKHKAYFAAGHTRPLESRLNILRKLKQAVRTHEADLIA 46
..||.:.:::.|.||.:|.|..:|:||..|..||.||:.:|.:::.
BL03952___ywd 1 MAERTTSIETTVTEQKQYFLSGATLAVENRLEQLNILKDAVKKNERNILE 50
BSNT_05812___ 47 ALYQDLHKSEQEAYSTEIGIVLEEISFVMKRLRKWSKPKRVKTPLTHLGS 96
||.:||:|||.|||.||||||||||.|:.:||:||:|||:.||.::|:||
BL03952___ywd 51 ALQKDLNKSEHEAYMTEIGIVLEEIRFISRRLKKWAKPKKAKTAVSHIGS 100
BSNT_05812___ 97 KSIIIPEPYGTVLVIAPWNYPLQLALSPLIGAIAAGNTVVLKPSEYTPAV 146
|||:|||||||||:|||||||.|||:||||||:|||||.|:||||..|||
BL03952___ywd 101 KSIVIPEPYGTVLIIAPWNYPFQLAVSPLIGALAAGNTAVIKPSELAPAV 150
BSNT_05812___ 147 SAILSKLISSVFPTDYVAMAEGGPDVSTALLQQPFDYIFFTGSVAVGKIV 196
|.::|::|..:||.:||::.|||...:..||:|.||||||||||.|||:|
BL03952___ywd 151 STVISEMIKDIFPPEYVSVIEGGVKTNQELLRQKFDYIFFTGSVPVGKVV 200
BSNT_05812___ 197 MEAAAKQLIPVTLELGGKSPCIVHKDADIQLAAKRIVFGKFTNAGQTCIA 246
||||||||||||||||||||||||||||::|||:||||||.|||||||||
BL03952___ywd 201 MEAAAKQLIPVTLELGGKSPCIVHKDADLKLAAQRIVFGKLTNAGQTCIA 250
BSNT_05812___ 247 PDYLFVHEDIKTKLAEEMKRAIREFYGPQPERNPQYGKIVSERHYQRLLS 296
||||.||:|:|.:|...:|::|:.|||.:||.:..||||:|:||::||:.
BL03952___ywd 251 PDYLLVHKDVKNELMRALKQSIQTFYGEKPESHLAYGKIISKRHFERLIR 300
BSNT_05812___ 297 FLNDGIPLTGGQSDPDHHKIAPTILEQVRDDSPVMQEEIFGPILPLFTYR 346
||.:...:|||....|..||||:|:::...:||||||||||||||:..|.
BL03952___ywd 301 FLQNENIVTGGTYQKDALKIAPSIIDEPDWESPVMQEEIFGPILPVIGYE 350
BSNT_05812___ 347 DIGEVIEKVQSRPKPLALYLFTTNKETERAVLGNLSFGGGCVNDTLMHVA 396
.|.:||:.||||||||||||||..|..:|.:|..:||||||:||||||.|
BL03952___ywd 351 TIEDVIQMVQSRPKPLALYLFTNEKTVQRHILSRISFGGGCINDTLMHTA 400
BSNT_05812___ 397 TPYLPFGGVGESGIGSYHGFDSFNTFTHKKSVVKQTNRFDFAFRYPSSKN 446
|||||||||||||||||||:.||.||:|:|||:||||.||.:||||||||
BL03952___ywd 401 TPYLPFGGVGESGIGSYHGYHSFKTFSHEKSVLKQTNLFDISFRYPSSKN 450
BSNT_05812___ 447 GLRMIRKILK 456
|||:|:|:|:
BL03952___ywd 451 GLRIIKKLLR 460
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