Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05825 and BL03950

See DNA alignment / Visit BSNT_05825 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:54
# Commandline: needle
#    -asequence pep-align/BSNT_05825___vpr.1.5803.seq
#    -bsequence pep-align/BL03950___vpr.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05825___vpr-BL03950___vpr.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05825___vpr-BL03950___vpr.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05825___vpr
# 2: BL03950___vpr
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 806
# Identity:     579/806 (71.8%)
# Similarity:   678/806 (84.1%)
# Gaps:           4/806 ( 0.5%)
# Score: 3070.5
# 
#
#=======================================

BSNT_05825___      1 MKKGIIRFLLVSFVLFFALSTGITGVQAAPASSKTSADLEKAEVFGDIDM     50
                     |:|.|:|:.:::|:|.|||||.:|||||.....|.|.:|||||::||||:
BL03950___vpr      1 MRKSIVRYFVMAFILLFALSTFLTGVQATSVPDKKSPELEKAEIYGDIDV     50

BSNT_05825___     51 TTSKKTTVIVELKEKSLAEAKEAGESQSKSKLKTARTKAKNKAIKAVKNG    100
                     |:.|:||||||||||||||||..||.|:|:.|||||    :||:|.:|..
BL03950___vpr     51 TSDKQTTVIVELKEKSLAEAKADGEKQTKASLKTAR----SKALKTLKKA     96

BSNT_05825___    101 KVNREYEQVFSGFSMKLPANEIPKLLAVKDVKAVYPNVTYKTDNMKDKDV    150
                     ||||||::|||||||||||:|||||||||:|||||||.|||.|::|.|||
BL03950___vpr     97 KVNREYDRVFSGFSMKLPASEIPKLLAVKEVKAVYPNATYKPDSVKGKDV    146

BSNT_05825___    151 TISEDAVSPQMDDSAPYIGANDAWDLGYTGKGIKVAIIDTGVEYNHPDLK    200
                     |::.||:.||||.|||:|||:.||..||||||||||:|||||:|.|||||
BL03950___vpr    147 TLAADAIYPQMDKSAPFIGADQAWKSGYTGKGIKVAVIDTGVDYTHPDLK    196

BSNT_05825___    201 KNFGQYKGYDFVDNDYDPKETPTGDPRGGATDHGTHVAGTVAANGTIKGV    250
                     .|||.|||||||||||||:|||||||||||||||||||||:||||.||||
BL03950___vpr    197 NNFGPYKGYDFVDNDYDPQETPTGDPRGGATDHGTHVAGTIAANGQIKGV    246

BSNT_05825___    251 APDATLLAYRVLGPGGSGTSENVIAGVERAVQDGADVMNLSLGNSLNNPD    300
                     ||:||||||||||||||||:||||||:|:||.|||.|||||||||||:||
BL03950___vpr    247 APEATLLAYRVLGPGGSGTTENVIAGIEKAVADGAKVMNLSLGNSLNSPD    296

BSNT_05825___    301 WATSTALDWAMSEGVVAVTSNGNSGPNGWTVGSPGTSREAISVGATQLPL    350
                     :|||.||||||:||||||||||||||..||||||||||.||||||:|||.
BL03950___vpr    297 YATSIALDWAMAEGVVAVTSNGNSGPENWTVGSPGTSRVAISVGASQLPY    346

BSNT_05825___    351 NEYAVTFGSYSSAKVMGYNKEDDVKALNNKEVELVEAGIGEAKDFEGKDL    400
                     |||:||..||||||||||.:|.|::|||.:||||||||:|:|.||.|||:
BL03950___vpr    347 NEYSVTLPSYSSAKVMGYQEEKDLEALNGQEVELVEAGLGQADDFSGKDV    396

BSNT_05825___    401 TGKVAVVKRGSIAFVDKADNAKKAGAIGMVVYNNLSGEIEANVPGMSVPT    450
                     .|||||::||.|.|||||:|||.|||||.|:|||.:|||||||.||:|||
BL03950___vpr    397 KGKVAVIQRGVIPFVDKAENAKNAGAIGAVIYNNATGEIEANVMGMAVPT    446

BSNT_05825___    451 IKLSLEDGEKLVSALKAGETKTTFKLTVSKALGEQVADFSSRGPVMDTWM    500
                     :|||.|:|||||..:|.|:....|...:.|.|||.:|.||||||||||||
BL03950___vpr    447 VKLSKEEGEKLVQQIKEGKHSVVFSFKLDKKLGETIASFSSRGPVMDTWM    496

BSNT_05825___    501 IKPDISAPGVNIVSTIPTHDPDHPYGYGSKQGTSMASPHIAGAVAVIKQA    550
                     ||||:||||||||||||||||.:||||||||||||||||:||..|::|||
BL03950___vpr    497 IKPDVSAPGVNIVSTIPTHDPKNPYGYGSKQGTSMASPHVAGTAAILKQA    546

BSNT_05825___    551 KPKWSVEQIKTAIMNTAVTLKDSDGEVYPHNAQGAGSARIMNAIKADSLV    600
                     ||.|:.||||..:||||..|.|.:|:..|||.|||||.|||.|:||.|:|
BL03950___vpr    547 KPDWTPEQIKGVLMNTAEKLTDENGKPLPHNTQGAGSIRIMEALKASSIV    596

BSNT_05825___    601 SPGSYSYGTFLKENGNETKNETFTIENQSSIRKSYTLEYSFNGSGISTSG    650
                     :|||:|||||||:.|.:||.:.|||||.||.||:|.|||||.|:||:.||
BL03950___vpr    597 TPGSHSYGTFLKDKGKQTKKQAFTIENLSSHRKAYQLEYSFKGTGITVSG    646

BSNT_05825___    651 TSRVVIPAHQTGKATAKVKVNTKKTKAGTYEGTVIVREGGKTVAKVPTLL    700
                     |.|||:||:|||||.|||.||:.|||||||||||.:||.|:.||::|.||
BL03950___vpr    647 TERVVVPANQTGKAAAKVTVNSAKTKAGTYEGTVYIREDGRKVAEIPLLL    696

BSNT_05825___    701 IVKEPDYPRVTSVSVSEGSVQGTYQIETYLPAGAEELAFLVYDSNLDFAG    750
                     |||||||||||||:|..|:.||.|.||.|||.|||||||||||.||:..|
BL03950___vpr    697 IVKEPDYPRVTSVTVEPGAKQGAYTIEAYLPGGAEELAFLVYDENLNLLG    746

BSNT_05825___    751 QAGIYKNQDKGYQYFDWDGTINGGTKLPAGEYYLLAYAANKGKSSQVLTE    800
                     |||:||||.||||.:.|:|.||....|.:|:||:||||:.|||||.||||
BL03950___vpr    747 QAGVYKNQGKGYQSYQWNGKINDAASLKSGKYYMLAYASAKGKSSYVLTE    796

BSNT_05825___    801 EPFTVE    806
                     :||.||
BL03950___vpr    797 DPFIVE    802


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_05825 and BL03950

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
