Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05847 and BL03944

See DNA alignment / Visit BSNT_05847 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:55
# Commandline: needle
#    -asequence pep-align/BSNT_05847___ywcB.1.5803.seq
#    -bsequence pep-align/BL03944___ywcB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05847___ywcB-BL03944___ywcB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05847___ywcB-BL03944___ywcB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05847___ywcB
# 2: BL03944___ywcB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 104
# Identity:      59/104 (56.7%)
# Similarity:    74/104 (71.2%)
# Gaps:           2/104 ( 1.9%)
# Score: 322.0
# 
#
#=======================================

BSNT_05847___      1 --MYKADYKQIAATPSFQAFLKQKRAFIVPSAIFFFVFYFSLPVLTSYFT     48
                       ..|.||.:.||:|.||..||:|||||||..|||.:|||.|||:|||||
BL03944___ywc      1 MGEGKIDYSKAAASPEFQRLLKRKRAFIVPMTIFFLLFYFLLPVMTSYFT     50

BSNT_05847___     49 FLNAPAIGAVSWAWLFAIAQFAMTWILSTVYSRRAAHFDRYVSALKEDLK     98
                     |||.||:||::|||:||||||.|||.|..||:::|..||:..|..|:.:.
BL03944___ywc     51 FLNQPAVGAITWAWVFAIAQFVMTWTLCIVYTKKAGQFDQIASDFKKKIG    100

BSNT_05847___     99 GEQI    102
                     |...
BL03944___ywc    101 GVDS    104


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