Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05859 and BL03941

See DNA alignment / Visit BSNT_05859 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:56
# Commandline: needle
#    -asequence pep-align/BSNT_05859___ywbH.1.5803.seq
#    -bsequence pep-align/BL03941___ywbH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05859___ywbH-BL03941___ywbH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05859___ywbH-BL03941___ywbH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05859___ywbH
# 2: BL03941___ywbH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 128
# Identity:      88/128 (68.8%)
# Similarity:   110/128 (85.9%)
# Gaps:           0/128 ( 0.0%)
# Score: 471.0
# 
#
#=======================================

BSNT_05859___      1 MKKLLLTVIQIALLFIFARLINWVTALLHINIPGSIIGIVILFTLLHFNI     50
                     ||..:..:.|:||||:|||.:|.:..:|||||||||:||:::|.||||.|
BL03941___ywb      1 MKTFIKGLGQVALLFLFARFMNLIVEVLHINIPGSILGIIVIFALLHFKI     50

BSNT_05859___     51 IKLEWIELGATWLLGELLLFFIPSAVGVIEYGDIMSKFGVSILLVVIIST    100
                     |||||||:||.|||.||||||:|||||::.||||:::||.||:|||:|||
BL03941___ywb     51 IKLEWIEIGALWLLAELLLFFVPSAVGIMNYGDILAEFGTSIILVVLIST    100

BSNT_05859___    101 FVVMVSTGTLTQLIAKRKEKKHTCSSEL    128
                     ||||||||.||||||||||:|.||||:.
BL03941___ywb    101 FVVMVSTGMLTQLIAKRKERKKTCSSDA    128


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