Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05860 and BL03940
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:56
# Commandline: needle
# -asequence pep-align/BSNT_05860___ywbG.1.5803.seq
# -bsequence pep-align/BL03940___ywbG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05860___ywbG-BL03940___ywbG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05860___ywbG-BL03940___ywbG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05860___ywbG
# 2: BL03940___ywbG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 227
# Identity: 189/227 (83.3%)
# Similarity: 203/227 (89.4%)
# Gaps: 2/227 ( 0.9%)
# Score: 937.0
#
#
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BSNT_05860___ 1 MFIGIVSLFLTVLVYLGAKKVYQRFPRVYTSPLLVTPAVLVGLLLLVNVP 50
|.||.:||..|||:|||||.||.|.|:||.|||||||.:||||||.:|||
BL03940___ywb 1 MLIGCLSLIATVLIYLGAKAVYSRHPKVYASPLLVTPVILVGLLLFINVP 50
BSNT_05860___ 51 YESYNLGGGLLTDMLQPATVAFAIPLYKYFPVLKKYAVEIILNVAVGSCI 100
:|:||.||.||||||||||||||||||||||||||||||||:|||||.||
BL03940___ywb 51 FEAYNAGGRLLTDMLQPATVAFAIPLYKYFPVLKKYAVEIIINVAVGCCI 100
BSNT_05860___ 101 AIISTALIAKWLHLGTGLIDSLVPRSVTTPIAMNVSEMIGGMPAVTAVFV 150
||:|||.|||...|...||:||||||||||||||||||||||||||||||
BL03940___ywb 101 AILSTAFIAKLFKLNEDLIESLVPRSVTTPIAMNVSEMIGGMPAVTAVFV 150
BSNT_05860___ 151 ILTALLGTVIGPMVIRYFRIDNEIARGVLLGTSAHGAGTSKAFELSSVSG 200
|||||.|:||||||||||||||||||||||||||||||||||||||||||
BL03940___ywb 151 ILTALFGSVIGPMVIRYFRIDNEIARGVLLGTSAHGAGTSKAFELSSVSG 200
BSNT_05860___ 201 TISSVSMILAAIMTLCAAPFLLSFM-- 225
||||||||||||:||||||||:|.:
BL03940___ywb 201 TISSVSMILAAIITLCAAPFLISLIAV 227
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