Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05860 and BL03940
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:56
# Commandline: needle
# -asequence dna-align/BSNT_05860___ywbG.1.5803.seq
# -bsequence dna-align/BL03940___ywbG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05860___ywbG-BL03940___ywbG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05860___ywbG-BL03940___ywbG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05860___ywbG
# 2: BL03940___ywbG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 703
# Identity: 520/703 (74.0%)
# Similarity: 520/703 (74.0%)
# Gaps: 44/703 ( 6.3%)
# Score: 1898.5
#
#
#=======================================
BSNT_05860___ 1 GTGTTCATCGGAATTG--TAAGCTTGTTTTTAACGGTTTTGGTGTATTTA 48
.||.|||||||| || |||||.||.|...|||.|||||..|.|||||.
BL03940___ywb 1 ATGCTCATCGGA--TGCTTAAGCCTGATCGCAACAGTTTTAATCTATTTG 48
BSNT_05860___ 49 GGAGCAAAAAAGGTATATCAACGCTTTCCGCGTGTTTATACGTCGCCGCT 98
||.||||||..|||.|||..||||..|||....||.|||.||||.||..|
BL03940___ywb 49 GGCGCAAAAGCGGTGTATTCACGCCATCCAAAGGTGTATGCGTCACCTTT 98
BSNT_05860___ 99 ATTGGTGACGCCCGCTGTGTTA---GTCGGTCTGCTGCTGCTGGTGAATG 145
||||||.|||| |.|||.|| |||||.||||||||..|..|.||.|
BL03940___ywb 99 ATTGGTCACGC---CGGTGATACTGGTCGGCCTGCTGCTTTTCATCAACG 145
BSNT_05860___ 146 TCCCGTACGAGTCCTATAATCTCGGC-GGCGGA---TTGCTGACCGATAT 191
||||.|..||..|.||.||| || |||||| |||.||||.||.||
BL03940___ywb 146 TCCCTTTTGAAGCGTACAAT----GCGGGCGGACGCTTGTTGACGGACAT 191
BSNT_05860___ 192 GCTACAGCCGGCCACCGTGGCATTCGCGATCCCGCTATATAAATATTTCC 241
|||.||||||||.||||||||.||.|||||.|||||.||.|||||.||.|
BL03940___ywb 192 GCTCCAGCCGGCAACCGTGGCTTTTGCGATTCCGCTGTACAAATACTTTC 241
BSNT_05860___ 242 CTGTTTTAAAGAAATACGCAGTGGAAATTATTTTGAATGTGGCCGTCGGT 291
|.||.||.||.||||||||.||.||.||.|||.|.||.|||||.||.||.
BL03940___ywb 242 CAGTCTTGAAAAAATACGCGGTTGAGATCATTATCAACGTGGCTGTAGGC 291
BSNT_05860___ 292 TCATGCATCGCGATTATTTCTACCGCTCTTATTGCGAAA-TGGCTTCACC 340
|..||.||||||||..|.||.||.||..||||.||.||| | |||||
BL03940___ywb 292 TGCTGTATCGCGATCCTGTCAACAGCGTTTATCGCAAAACT--CTTCA-- 337
BSNT_05860___ 341 TCGGC---------ACCGGCTTAATTGACAGCCTCGTCCCGAGATCAGTG 381
.|| ||| |.||.||.||||||||.||.|||||.||.
BL03940___ywb 338 --AGCTGAATGAAGACC----TGATCGAGAGCCTCGTTCCCAGATCTGTC 381
BSNT_05860___ 382 ACAACGCCGATCGCGATGAACGTATCTGAAATGATCGGCGGAATGCCTGC 431
||||||||.||.||.||||||||.|||||||||||||||||||||||.||
BL03940___ywb 382 ACAACGCCAATTGCAATGAACGTTTCTGAAATGATCGGCGGAATGCCGGC 431
BSNT_05860___ 432 CGTCACAGCCGTGTTTGTGATTTTAACCGCTTTGCTCGGCACAGTGATCG 481
.||.||.||.||.|||||.||.||.|||||.|||.||||..|||||||||
BL03940___ywb 432 GGTGACCGCTGTTTTTGTCATATTGACCGCCTTGTTCGGATCAGTGATCG 481
BSNT_05860___ 482 GTCCGATGGTCATCCGTTATTTCCGCATTGATAACGAAATCGCGCGGGGC 531
|.|||||||||||.||.||.|||||.||||||||.|||||||||.|||||
BL03940___ywb 482 GACCGATGGTCATTCGCTACTTCCGGATTGATAATGAAATCGCGAGGGGC 531
BSNT_05860___ 532 GTGCTGCTCGGCACAAGCGCGCACGGAGCGGGAACGTCAAAGGCATTTGA 581
||.|||||.|||||||||||.|||||.||.||.||||||||.||||||||
BL03940___ywb 532 GTACTGCTTGGCACAAGCGCCCACGGCGCAGGTACGTCAAAAGCATTTGA 581
BSNT_05860___ 582 GCTTAGCTCTGTGTCCGGCACGATTTCCAGCGTATCGATGATCTTAGCTG 631
|||.|||||.||||||||.|||||.||.|||||.|||||||||.|.||.|
BL03940___ywb 582 GCTGAGCTCCGTGTCCGGAACGATCTCAAGCGTGTCGATGATCCTGGCCG 631
BSNT_05860___ 632 CGATTATGACGCTTTGCGCGGCGCCGTTTTTGCTTTCATTTA------TG 675
||||.||.|||||||||||.|||||||||.||.||||..||| ||
BL03940___ywb 632 CGATCATCACGCTTTGCGCAGCGCCGTTTCTGATTTCCCTTATTGCAGTG 681
BSNT_05860___ 676 TAA 678
|||
BL03940___ywb 682 TAA 684
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