Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05866 and BL03939

See DNA alignment / Visit BSNT_05866 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:56
# Commandline: needle
#    -asequence pep-align/BSNT_05866___ywbC.1.5803.seq
#    -bsequence pep-align/BL03939___ywbC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05866___ywbC-BL03939___ywbC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05866___ywbC-BL03939___ywbC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05866___ywbC
# 2: BL03939___ywbC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 127
# Identity:      79/127 (62.2%)
# Similarity:   102/127 (80.3%)
# Gaps:           2/127 ( 1.6%)
# Score: 432.0
# 
#
#=======================================

BSNT_05866___      1 MAKRIDHTGIMVRDINASITFYEEVLGMKLKDRITHTNGVIELAFLGFED     50
                     || ||||.|:||:||:|||.||:.|:||.||.|:||||||::|||||||:
BL03939___ywb      1 MA-RIDHVGLMVKDIDASIAFYQNVIGMTLKGRMTHTNGVMKLAFLGFEN     49

BSNT_05866___     51 GPETEIELIQGYSSELPAEGKVHHIALLTDDIAAEYTKAKKMNAKFIDEE    100
                     ..|||:|||:||:..||.||||||.|:.||||.||:.:.|....|.:::|
BL03939___ywb     50 RDETELELIEGYNDNLPQEGKVHHFAVSTDDIEAEFDRVKGAGIKLMEDE     99

BSNT_05866___    101 ITTLPNGYRYFYIEGPDGEWIEFFQR-    126
                     ||.||||:|||::.||:||.:||||| 
BL03939___ywb    100 ITVLPNGFRYFFLFGPEGEMVEFFQRT    126


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