Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05866 and BL03939
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:56
# Commandline: needle
# -asequence dna-align/BSNT_05866___ywbC.1.5803.seq
# -bsequence dna-align/BL03939___ywbC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05866___ywbC-BL03939___ywbC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05866___ywbC-BL03939___ywbC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05866___ywbC
# 2: BL03939___ywbC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 402
# Identity: 255/402 (63.4%)
# Similarity: 255/402 (63.4%)
# Gaps: 42/402 (10.4%)
# Score: 701.0
#
#
#=======================================
BSNT_05866___ 1 ATGGCAAAACGAATTGACCATACAGGCATCATGGTAAGAGATATTAACGC 50
||||| .|||||.|||||...|||..|.|||||.|.|||.|||.|.||
BL03939___ywb 1 ATGGC---GCGAATCGACCACGTAGGACTGATGGTGAAAGACATTGATGC 47
BSNT_05866___ 51 GTCCATCACATTTTATGAAGAGGTACTCGGCATGAAATTGAAGGATCGCA 100
.||.|||.||||.||..|..|.||..||||.||||...||||.|...|.|
BL03939___ywb 48 TTCGATCGCATTCTACCAGAATGTGATCGGAATGACGCTGAAAGGCAGAA 97
BSNT_05866___ 101 TCACACACACGAACGGTGTAATCGAGCTTGCATTTCTTGGCTTTGA---- 146
|.||.||.||.|||||.||.||..|.||.||.|||.|.||||||||
BL03939___ywb 98 TGACCCATACAAACGGCGTCATGAAACTCGCTTTTTTAGGCTTTGAGAAC 147
BSNT_05866___ 147 AGACGGACCGGAAACAGAAATTGAACTGATTCAAGGCTACAGCAGCGAGC 196
||| ||| ||.|||||..|.||||||||..|.||.||.|.|..|.|.|
BL03939___ywb 148 AGA--GAC--GAGACAGAGCTCGAACTGATCGAGGGATATAACGACAACC 193
BSNT_05866___ 197 TTCCCGCTGAAGGAAAAGTGCACCACATTGCCCTGCT-GACTGATGACAT 245
||||....|||||||||||.||.||..|||||.| || |||.|||||.||
BL03939___ywb 194 TTCCTCAGGAAGGAAAAGTTCATCATTTTGCCGT-CTCGACCGATGATAT 242
BSNT_05866___ 246 CGCGGCTGAATATACAAAAGCGAAAAAAATGAACGCG--------AAATT 287
||.||||||||.| .|..|||.|| ||.||| ||..|
BL03939___ywb 243 CGAGGCTGAATTT--GATCGCGTAA------AAGGCGCCGGCATCAAGCT 284
BSNT_05866___ 288 TATCGACGAGGAGATCACAACACTTCCAAACGGATACCG----TTATTTC 333
.||.||.||.|||||.||...|.|.||.|||||.|.||| ||.||||
BL03939___ywb 285 GATGGAAGATGAGATTACCGTATTGCCGAACGGCTTCCGCTATTTTTTTC 334
BSNT_05866___ 334 TATATCGAAGGCCCTGACGGTG-AGTGGATTGAGTTCTTTCAGCG---AT 379
|.|.| ||.||.||.||.| |.||| |.|||||.|||||..| ||
BL03939___ywb 335 TTTTT----GGGCCCGAAGGAGAAATGG-TCGAGTTTTTTCAAAGAACAT 379
BSNT_05866___ 380 AA 381
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BL03939___ywb 380 AA 381
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