Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00931 and BL03938
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:29
# Commandline: needle
# -asequence pep-align/BSNT_00931___ydfH.1.5803.seq
# -bsequence pep-align/BL03938___ydfH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00931___ydfH-BL03938___ydfH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00931___ydfH-BL03938___ydfH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00931___ydfH
# 2: BL03938___ydfH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 407
# Identity: 335/407 (82.3%)
# Similarity: 357/407 (87.7%)
# Gaps: 20/407 ( 4.9%)
# Score: 1709.0
#
#
#=======================================
BSNT_00931___ 1 --------------------MLALRVPGLAFILMIYIASIVLQFVSGGWS 30
||||||||||||||||:|||||||::|.||
BL03938___ydf 1 MLIRNPFKEKYYSHDRRALNMLALRVPGLAFILMIYVASIVLQFLNGSWS 50
BSNT_00931___ 31 ILLLYAFTILIAIFALLHWHSYRWVKKRVILYFVVQGLITFALANLMTGF 80
||||..||:|.|||||||||||||||||||||||:||||||.|||:|:||
BL03938___ydf 51 ILLLNVFTVLTAIFALLHWHSYRWVKKRVILYFVLQGLITFTLANVMSGF 100
BSNT_00931___ 81 FILVIIGLYAFLIGQILGMADRRRTFLILYLLLLLVINSAYHLHKGEVLH 130
.:|:||||||||||||:||||||:|||||||||||.|...||:||||.||
BL03938___ydf 101 LVLIIIGLYAFLIGQIIGMADRRKTFLILYLLLLLSITVLYHIHKGEYLH 150
BSNT_00931___ 131 FIVIAGPIMIVIITYAATFFAQVDEKIKAQLTLERLELAHQQVEQLTLQN 180
|:|||.||||||||||||||||||||.|||||||||||||||||||||||
BL03938___ydf 151 FLVIAVPIMIVIITYAATFFAQVDEKTKAQLTLERLELAHQQVEQLTLQN 200
BSNT_00931___ 181 ERQRMARDLHDTLAQGLVSLNMQLDAIHVHLAKGNTERAKEIIQQSMKRV 230
|||||||||||||||||||||||||||||||||.||||||||:||||.||
BL03938___ydf 201 ERQRMARDLHDTLAQGLVSLNMQLDAIHVHLAKDNTERAKEIVQQSMNRV 250
BSNT_00931___ 231 KSTLADARSAIDDLRRKSEEIGVLKERITSLMDHFIESTGMACLLDYRLH 280
|||||||||||||||.||||||.||||||||||||.|||||||.|||||.
BL03938___ydf 251 KSTLADARSAIDDLRSKSEEIGFLKERITSLMDHFQESTGMACFLDYRLD 300
BSNT_00931___ 281 QVLDVRTAENCYYIIGECMTNAAKHAEAKTIWISIWDDEKGRLHLTVKDN 330
||.|||||||||||||||:.||.|||||:||.:|||||:|.|||||||||
BL03938___ydf 301 QVPDVRTAENCYYIIGECIANAVKHAEAETISVSIWDDDKRRLHLTVKDN 350
BSNT_00931___ 331 GKGFNVEKGKKKRGHYGLLGIQERVRAINGQFNIKSAKLKGTQIEITVPI 380
||||:||||||||||||||||:|||||:.|||||||...|||||:|||||
BL03938___ydf 351 GKGFDVEKGKKKRGHYGLLGIEERVRAMKGQFNIKSTTSKGTQIDITVPI 400
BSNT_00931___ 381 QGEMQDE 387
||||.||
BL03938___ydf 401 QGEMPDE 407
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