Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00934 and BL03936

See DNA alignment / Visit BSNT_00934 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:29
# Commandline: needle
#    -asequence pep-align/BSNT_00934___ydfJ.1.5803.seq
#    -bsequence pep-align/BL03936___ydfJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00934___ydfJ-BL03936___ydfJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00934___ydfJ-BL03936___ydfJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00934___ydfJ
# 2: BL03936___ydfJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 724
# Identity:     652/724 (90.1%)
# Similarity:   667/724 (92.1%)
# Gaps:          36/724 ( 5.0%)
# Score: 3243.0
# 
#
#=======================================

BSNT_00934___      1 ------------------------------------MKPSFSEDMSIPDT     14
                                                         :|||||||||||||
BL03936___ydf      1 MSKMLYKLGGWVARNRIKVICAWIVVLVASIGLAITLKPSFSEDMSIPDT     50

BSNT_00934___     15 PSEKAMDVIQKEFPHGPDKGSIRVIFGAGDGEKLTGKPAKKAIEDTLKEI     64
                     ||||||||||||||||||||||||||||.||||||.|.|:||||:|||||
BL03936___ydf     51 PSEKAMDVIQKEFPHGPDKGSIRVIFGAEDGEKLTSKSAEKAIENTLKEI    100

BSNT_00934___     65 SKDDSVDSIASPFVTGTIAKDGTVAYADIKYKSSADDIKDYSIKHLKDSL    114
                     .||.||||||||||||||||||||||||||||||||||||||||||||||
BL03936___ydf    101 DKDGSVDSIASPFVTGTIAKDGTVAYADIKYKSSADDIKDYSIKHLKDSL    150

BSNT_00934___    115 KLVDDEGLQTELSGDVPGAEMEIGSVSEIVGIILAFVVLAITLGSLLIAG    164
                     |:.|.|||||||||||||||||||.:||||||||||:|||||.|||||||
BL03936___ydf    151 KMADYEGLQTELSGDVPGAEMEIGGISEIVGIILAFIVLAITFGSLLIAG    200

BSNT_00934___    165 LPILTALIGLGVSIGLVLIGTQVFDIASVSLSLAGMIGLAVGIDYALFIF    214
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL03936___ydf    201 LPILTALIGLGVSIGLVLIGTQVFDIASVSLSLAGMIGLAVGIDYALFIF    250

BSNT_00934___    215 TKHRQFLGEGIQKNESIARAVGTAGSAVVFAGLTVIVALCGLTVVNIPFM    264
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BL03936___ydf    251 TKHRQFLGEGIQKNESIARATGTAGSAVVFAGLTVIVALCGLTVVNIPFM    300

BSNT_00934___    265 SAMGLTAGLSVLMAVLASITLVPAVLSIAGKRMIPKSNKKIEKQSTETNV    314
                     |||||||||||||||||||||||||||||||||:||:|||.||||.||||
BL03936___ydf    301 SAMGLTAGLSVLMAVLASITLVPAVLSIAGKRMVPKANKKKEKQSAETNV    350

BSNT_00934___    315 WGRFVTKNPIILSVCSILILIVISIPSMHLELGLPDAGMKAKDNPDRRAY    364
                     ||||||||||:|||||||||:|||||||||||||||||||||||||||||
BL03936___ydf    351 WGRFVTKNPIMLSVCSILILLVISIPSMHLELGLPDAGMKAKDNPDRRAY    400

BSNT_00934___    365 ALLAEGFGEGFNGQLTIVADATNATENKAEAFADAVKEIKGLDHVASVTP    414
                     .|||:||||||||||||||||.:.||||||||||||||||.|||||||||
BL03936___ydf    401 DLLADGFGEGFNGQLTIVADAASVTENKAEAFADAVKEIKELDHVASVTP    450

BSNT_00934___    415 AMPNKEGNFAIITVVPETGPNDVTTKDLVHDVRSLSDKNGVDLLVTGSTA    464
                     ||||||||||||||||||||||..|||||.||||||||||||||||||||
BL03936___ydf    451 AMPNKEGNFAIITVVPETGPNDAATKDLVKDVRSLSDKNGVDLLVTGSTA    500

BSNT_00934___    465 VNIDISDRLNDAIPVFAVLIVGFAFVLLTIVFRSLLVPLVAVAGFMLTMT    514
                     |||||||||||||||||||||||||||||||||||||||||||||:||||
BL03936___ydf    501 VNIDISDRLNDAIPVFAVLIVGFAFVLLTIVFRSLLVPLVAVAGFILTMT    550

BSNT_00934___    515 ATLGICVFVLQDGNLIDFFKIPEKGPILAFLPILSIGILFGLAMDYQVFL    564
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL03936___ydf    551 ATLGICVFVLQDGNLIDFFKIPEKGPILAFLPILSIGILFGLAMDYQVFL    600

BSNT_00934___    565 VSRMREEYVKTKNPVQAIQAGLKHSGPVVTAAGLIMIFVFAGFIFAGEAS    614
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL03936___ydf    601 VSRMREEYVKTKNPVQAIQAGLKHSGPVVTAAGLIMIFVFAGFIFAGEAS    650

BSNT_00934___    615 IKANGLALSFGVLFDAFIVRMTLIPSVMKLMGNAAWYLPKWLDKIIPNVD    664
                     ||||||||||||||||||||||||||:|||||||||||||||||||||||
BL03936___ydf    651 IKANGLALSFGVLFDAFIVRMTLIPSLMKLMGNAAWYLPKWLDKIIPNVD    700

BSNT_00934___    665 IEGHQLTKEIQPEIDHEQKKQISV    688
                     |||||||||||||..||||||||:
BL03936___ydf    701 IEGHQLTKEIQPETAHEQKKQISM    724


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