Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05895 and BL03931
See
DNA alignment /
Visit
BSNT_05895 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:58
# Commandline: needle
# -asequence pep-align/BSNT_05895___dltD.1.5803.seq
# -bsequence pep-align/BL03931___dltD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05895___dltD-BL03931___dltD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05895___dltD-BL03931___dltD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05895___dltD
# 2: BL03931___dltD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 393
# Identity: 254/393 (64.6%)
# Similarity: 315/393 (80.2%)
# Gaps: 5/393 ( 1.3%)
# Score: 1397.0
#
#
#=======================================
BSNT_05895___ 1 MKKRF-FGPIILAFILFAGAIAIPSSWLTGFITDKRVKESATALNPSMFQ 49
||||| ||||||||:||..||.||::|||..:...||:.|||.|||.|||
BL03931___dlt 1 MKKRFLFGPIILAFLLFFTAILIPNAWLTKLVPKDRVETSATELNPMMFQ 50
BSNT_05895___ 50 GLYLQDQMLKDPTYLPIYGSSELSRLDEFHPSNYFQVNNEGFTPYLVGKG 99
|:|||.:.|:||.||||:|||||||||.|||||||:|||:||||||||||
BL03931___dlt 51 GMYLQGKALEDPKYLPIFGSSELSRLDAFHPSNYFKVNNQGFTPYLVGKG 100
BSNT_05895___ 100 GSQSLIHSLNFAAHMDQLKGKKIVFIVSPQWFIKRGSDEQHFAPNYSALQ 149
|||||||::||||..|||||||||||:|||||.|.||||.|||||:||||
BL03931___dlt 101 GSQSLIHAINFAAQSDQLKGKKIVFIISPQWFQKHGSDEAHFAPNFSALQ 150
BSNT_05895___ 150 GLDLAFNDQIDPEIKKKMMKRMLRFKAVQNDAILSELYKAMVNGQTWKVN 199
..||.||..:|..:|||::||||:|.||:|||:||.|:||.::.....::
BL03931___dlt 151 AYDLVFNQNVDSGLKKKIIKRMLKFHAVKNDALLSALFKAELDQDKVALS 200
BSNT_05895___ 200 ALKPAAKVYYSMLEKKDLYYSTTESSGPKRYISQSVKDKSWSELNKLADQ 249
.|.|.||.|.|:|||||:|||..|..||||.|||.||:|||.||.::|::
BL03931___dlt 201 LLTPPAKAYQSILEKKDIYYSMVEGDGPKRTISQDVKNKSWDELKQMAEK 250
BSNT_05895___ 250 SGKRHSGSNDFHIDNPVYKKLKPKVPKLKGKNKGRSYAVSPEYGDFEMML 299
.|.:.|.:|:|.|.|.||||||||:.||||.||..:||.|.|:.||.:|:
BL03931___dlt 251 VGAKESRNNEFKISNGVYKKLKPKLKKLKGHNKKMNYAESVEFHDFHLMM 300
BSNT_05895___ 300 DILKDAGAEPMFVTIPVNGKWYDYTGFPKKGRTDYYKKVNKQIRAKGFQV 349
|:||::||||:|:::||:||:|||||||||||||:|||:.|:|..:||||
BL03931___dlt 301 DVLKESGAEPLFISVPVHGKFYDYTGFPKKGRTDFYKKIKKEIEQEGFQV 350
BSNT_05895___ 350 ADFSGHEYDPYFMKDTIHIGWKGWVYVDKAIDEFYKTGKVTSS 392
||.:.|||||||:|||:|:|||||||||:.|:.|||...
BL03931___dlt 351 ADLTNHEYDPYFLKDTLHLGWKGWVYVDQEIEAFYKKSS---- 389
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.