Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05895 and BL03931
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:58
# Commandline: needle
# -asequence dna-align/BSNT_05895___dltD.1.5803.seq
# -bsequence dna-align/BL03931___dltD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05895___dltD-BL03931___dltD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05895___dltD-BL03931___dltD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05895___dltD
# 2: BL03931___dltD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1232
# Identity: 821/1232 (66.6%)
# Similarity: 821/1232 (66.6%)
# Gaps: 115/1232 ( 9.3%)
# Score: 2465.0
#
#
#=======================================
BSNT_05895___ 1 ATGAAAAAGCGTTTT---TTCGGTCCAATTATTTTGGCGTTT---ATTCT 44
||||||||||||||| |||||.|||||.||.|||||.||| .||.|
BL03931___dlt 1 ATGAAAAAGCGTTTTTTATTCGGGCCAATCATCTTGGCATTTTTACTTTT 50
BSNT_05895___ 45 ATTCGCAGGCGCCATCGCAATTCCATCTTCATGGCTGACA-----GGCTT 89
.|||.| |||.|||...||.|||..|.||||||||||| || ||
BL03931___dlt 51 TTTCAC---CGCGATCTTGATCCCAAATGCATGGCTGACAAAGCTGG-TT 96
BSNT_05895___ 90 CATCACCGATAAGCGTGT-GAAAGAGTCAGCAACAGCCTTGAATCCGAGT 138
|.| |..||| ||.|| |||| ..|||||.||||..||.||.||||..
BL03931___dlt 97 CCT-AAAGAT---CGCGTCGAAA-CTTCAGCTACAGAATTAAACCCGATG 141
BSNT_05895___ 139 ATGTTTCAAGGGCTATATTTACAAGATCAGA-TGCTCAAAGATCCGACAT 187
|||||.||.|||.|.|||.|.|||| .||.| .|||..||||.||||.||
BL03931___dlt 142 ATGTTCCAGGGGATGTATCTTCAAG-GCAAAGCGCTTGAAGACCCGAAAT 190
BSNT_05895___ 188 ATCTTCCGATTTACGGGTCTTCTGAGCTTTCTCGGCTGGACGAGTTCCAC 237
||||.|||||||.|||.||.||.||..|.||.|||.|.||.|..|||||.
BL03931___dlt 191 ATCTGCCGATTTTCGGATCATCGGAATTGTCCCGGTTAGATGCATTCCAT 240
BSNT_05895___ 238 CCATCTAATTATTTTCAGGTAAACAATGAGGGATTCACGCCATACCTTGT 287
||.|||||.||||||.|.|||||||||.|.||.||||||||.|||||.||
BL03931___dlt 241 CCGTCTAACTATTTTAAAGTAAACAATCAAGGGTTCACGCCTTACCTGGT 290
BSNT_05895___ 288 CGGCAAAGGCGGATCCCAGTCATTGATTCATTCTTTAAACTTCGCTGCCC 337
|||.||||||||.||.|||||.||||||||..|..|.|||||.||.||.|
BL03931___dlt 291 CGGAAAAGGCGGCTCACAGTCCTTGATTCACGCGATCAACTTTGCGGCGC 340
BSNT_05895___ 338 ACATGGATCAGCTGAAGGGCAAAAAAATCGTATTCATCGTGTCTCCGCAA 387
|....|||||..|.||||||||.||||||||.|||||..|.||||||||.
BL03931___dlt 341 AGTCTGATCAATTAAAGGGCAAGAAAATCGTTTTCATTATCTCTCCGCAG 390
BSNT_05895___ 388 TGGTTTATTAAGCGCGGGTCTGATGAACAGCATTTCGCGCCGAACTATTC 437
||||||...||.|.|||.||.||.|||...||.||.||||||||||..||
BL03931___dlt 391 TGGTTTCAAAAACACGGCTCGGACGAAGCCCACTTTGCGCCGAACTTCTC 440
BSNT_05895___ 438 TGCGCTGCAAGGGCTT--GATTTGGCATTTAACGATCAGA---TCGA--C 480
.||..|||| |||.| |||.|.|..|| |.||||.| |||| |
BL03931___dlt 441 GGCTTTGCA--GGCATACGATCTTGTGTT---CAATCAAAATGTCGATTC 485
BSNT_05895___ 481 C---CTGAAATTAAAAAGAAAATGATGAAACGCATGCTTCGCTTTAAGGC 527
| ||| ||.||.|||||.||.||||||||||||...|||.|.||
BL03931___dlt 486 CGGGCTG-----AAGAAAAAAATCATCAAACGCATGCTTAAATTTCATGC 530
BSNT_05895___ 528 TGTGCAAAACGATGCCATTCTTTCTGAGCTGTACAAAGCAATGGTAAACG 577
.|||.||||.||.||..|.|||||.|..||.|..|||||...|.| ||
BL03931___dlt 531 AGTGAAAAATGACGCTCTGCTTTCAGCCCTTTTTAAAGCCGAGCT---CG 577
BSNT_05895___ 578 GCCA-GACGTGGAAAGTGAACGC---------GCTGAAGCCGGCGGCGAA 617
.||| ||| ||.||| || .||||.||||.||||.||
BL03931___dlt 578 ACCAGGAC----AAGGTG---GCACTGTCTCTTCTGACGCCGCCGGCAAA 620
BSNT_05895___ 618 AGTGTATTACAGCATGCTGGAAAAGAAAGATCTGTATTATTCAACGACAG 667
||..||..|.|||||.|||||.||.||.||..|.||||||||.|.|...|
BL03931___dlt 621 AGCTTACCAAAGCATTCTGGAGAAAAAGGACATCTATTATTCCATGGTTG 670
BSNT_05895___ 668 AATCATCCGGGCCAAAGCGCTATATCTCGCAGTCAGTAAAGGATAAGTCA 717
||..|..|||.||.|||||....||.||.||....|||||..|.||.||.
BL03931___dlt 671 AAGGAGACGGACCGAAGCGGACCATTTCCCAAGATGTAAAAAACAAATCG 720
BSNT_05895___ 718 TGGTCTGAATTGAATAAACTAGCGGATCAA---TCGGGCAAACGCCA--- 761
|||..||||||.||..|..|.||.|| || |||| |||||
BL03931___dlt 721 TGGGATGAATTAAAACAGATGGCCGA--AAAGGTCGG-----CGCCAAAG 763
BSNT_05895___ 762 ---CTCCGGTTCTAACGATTTTCACATCGACAACCCTGTCTATAAAAAGC 808
| ||||..| ||.||.|||.|.|||...|||...||.|||||.||..
BL03931___dlt 764 AATC-CCGGAAC-AATGAGTTTAAAATCTCAAACGGCGTTTATAAGAAAT 811
BSNT_05895___ 809 TGAAGCCGAAAGTGCCTAAGCTGAAAGGGAAAAACAAAGGAAGATCG--- 855
||||||||||..||...|||||.|||||..|.||.||| ||||| |
BL03931___dlt 812 TGAAGCCGAAGCTGAAAAAGCTTAAAGGCCATAATAAA--AAGAT-GAAC 858
BSNT_05895___ 856 TATGCGGTGTCACCG--GAATATGGCGACTTTGAA----ATGATGCTCGA 899
|||||.|.|| ||| ||.|....||| |||..| |||||| ||
BL03931___dlt 859 TATGCCGAGT--CCGTCGAGTTCCACGA-TTTCCATCTCATGATG---GA 902
BSNT_05895___ 900 TATCCTGAAGGATGCGGGCGCAGAGCCTATGTTTGTCACCATTCCTGTTA 949
|.|..||||.||..|.||||||||.||..||||..||.|..||||.||..
BL03931___dlt 903 TGTTTTGAAAGAATCCGGCGCAGAACCGCTGTTCATCTCGGTTCCGGTCC 952
BSNT_05895___ 950 ACGGGAAATGGTACGATTACACGGGCTTCCCGAAAAAAGGACGCACTGAC 999
||||.||||..|||||.||.||.||||||||.||||||||.||.||.||.
BL03931___dlt 953 ACGGCAAATTTTACGACTATACCGGCTTCCCTAAAAAAGGCCGGACGGAT 1002
BSNT_05895___ 1000 TATTACAAAAAGGTAAATAAACAAATCAGAGCGA-AGGGTTTCCAGGTTG 1048
|..||.||||||.|.||.|||.||||| ||.|.| ||||.||.||.||||
BL03931___dlt 1003 TTCTATAAAAAGATCAAAAAAGAAATC-GAACAAGAGGGCTTTCAAGTTG 1051
BSNT_05895___ 1049 CTGATTTCTCAGGGCATGAATATGACCCGTATTTCATGAAAGACACCATT 1098
|||||||..|....|||||||||||.|||||.|||.|||||||.||..|.
BL03931___dlt 1052 CTGATTTAACGAATCATGAATATGATCCGTACTTCTTGAAAGATACGCTC 1101
BSNT_05895___ 1099 CACATCGGCTGGAAAGGCTGGGTGTATGTCGATAAAGCAATTGACGAATT 1148
|||.|.|||||||||||||||||.||.||||||.|.|..||.||.|..||
BL03931___dlt 1102 CACCTTGGCTGGAAAGGCTGGGTTTACGTCGATCAGGAGATCGAAGCTTT 1151
BSNT_05895___ 1149 TTATAAAACCGGAAAAGTCACTTCATCCTGA- 1179
||||| |||||||| |||| |
BL03931___dlt 1152 TTATA-------AAAAGTCA--TCAT----AA 1170
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