Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05898 and BL03930
See
DNA alignment /
Visit
BSNT_05898 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:58
# Commandline: needle
# -asequence pep-align/BSNT_05898___ywaA.1.5803.seq
# -bsequence pep-align/BL03930___ywaA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05898___ywaA-BL03930___ywaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05898___ywaA-BL03930___ywaA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05898___ywaA
# 2: BL03930___ywaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity: 289/363 (79.6%)
# Similarity: 330/363 (90.9%)
# Gaps: 0/363 ( 0.0%)
# Score: 1547.0
#
#
#=======================================
BSNT_05898___ 1 MTKQTIRVELTSTKKPKPDPNQLSFGRVFTDHMFVMDYAADKGWYDPRII 50
||||||.|:|::.||.||:.::|.|||.||||||:|||.|:.||:||||:
BL03930___ywa 1 MTKQTISVQLSTAKKQKPEADKLEFGRTFTDHMFIMDYTAENGWHDPRIV 50
BSNT_05898___ 51 PYQPLSMDPAAMVYHYGQTVFEGLKAYVSEDDHVLLFRPEKNMERLNQSN 100
||||:.||||||||||||:||||||||:|.:..|||||||||.||||:||
BL03930___ywa 51 PYQPIEMDPAAMVYHYGQSVFEGLKAYLSSEGRVLLFRPEKNFERLNKSN 100
BSNT_05898___ 101 DRLCIPQIDEEQVLEGLKQLVAIDKDWIPNAEGTSLYIRPFIIATEPFLG 150
||||||::|.|.|||||||||.|||:|||.|||||||||||||:|||:||
BL03930___ywa 101 DRLCIPRVDPEIVLEGLKQLVQIDKEWIPQAEGTSLYIRPFIISTEPYLG 150
BSNT_05898___ 151 VAASHTYKLLIILSPVGSYYKEGIKPVKIAVESEFVRAVKGGTGNAKTAG 200
||.|:.||:|||||||||||||||:||||||||||||||.||||||||||
BL03930___ywa 151 VAPSNMYKMLIILSPVGSYYKEGIRPVKIAVESEFVRAVAGGTGNAKTAG 200
BSNT_05898___ 201 NYASSLKAQQVAEEKGFSQVLWLDGIEKKYIEEVGSMNIFFKINGEIVTP 250
|||:|||||:|||.|||||||||||:|||||||||||||||||:||||||
BL03930___ywa 201 NYAASLKAQEVAESKGFSQVLWLDGVEKKYIEEVGSMNIFFKISGEIVTP 250
BSNT_05898___ 251 MLNGSILEGITRNSVIALLKHWGLQVSERKIAIDEVIQAHKDGILEEAFG 300
.|||||||||||||||.|||.|||.|:||||::||::||||||:||||||
BL03930___ywa 251 ALNGSILEGITRNSVIHLLKQWGLSVTERKISVDELVQAHKDGLLEEAFG 300
BSNT_05898___ 301 TGTAAVISPVGELIWQDETLSINNGETGEIAKKLYDTITGIQKGAVADEF 350
|||||||||||||||:||:|.||||:||||||:||.|||||||||:.|.|
BL03930___ywa 301 TGTAAVISPVGELIWKDESLVINNGQTGEIAKRLYQTITGIQKGALPDTF 350
BSNT_05898___ 351 GWTTEVAALTESK 363
|||.||..:::|.
BL03930___ywa 351 GWTVEVDKVSQSC 363
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.