Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04935 and BL03929
See
DNA alignment /
Visit
BSNT_04935 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:07
# Commandline: needle
# -asequence pep-align/BSNT_04935___yvqJ.1.5803.seq
# -bsequence pep-align/BL03929___yvqJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04935___yvqJ-BL03929___yvqJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04935___yvqJ-BL03929___yvqJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04935___yvqJ
# 2: BL03929___yvqJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 426
# Identity: 294/426 (69.0%)
# Similarity: 361/426 (84.7%)
# Gaps: 10/426 ( 2.3%)
# Score: 1604.5
#
#
#=======================================
BSNT_04935___ 1 MVNLIESD----SIWKRNFNYLFFSRIVKISGDMFAFNSILWFLIYDGKG 46
.| |:|::|:.:||.||::|||.|.|||||||||||:||||
BL03929___yvq 1 ------MDQTKLSVWEKNYTFLFISRLIKISADCFAFNSILWFLIFDGKG 44
BSNT_04935___ 47 AIGTALLIAVTFLPEAVLAPVTGPFMKQTTLKFWMYFSDLTRAAIVLIIP 96
||||:||:||||||||.|||:|||.:|::.||||||||||||||:|:.||
BL03929___yvq 45 AIGTSLLLAVTFLPEAFLAPITGPLVKRSALKFWMYFSDLTRAAVVITIP 94
BSNT_04935___ 97 LCHFAGFSPLWFVMTLMIVHSATGAAYNPASIALIPQIVNEQGIQKANAV 146
:|:..||||:|||:.|||:||||||.||||||.||||||||..||||||:
BL03929___yvq 95 ICYLNGFSPMWFVLGLMIIHSATGATYNPASITLIPQIVNENLIQKANAI 144
BSNT_04935___ 147 LQSSAQIVRLGAVTLCGAFLTFISPSYTMLIALVLYLVSGFLVLFIKYTA 196
||||::|:|||||||||..||||.|:.|::.:.:.|::||..:|.|||:.
BL03929___yvq 145 LQSSSEIIRLGAVTLCGVLLTFIGPATTLVFSFIFYIISGLFMLCIKYSI 194
BSNT_04935___ 197 VESQSESAVVTQRGTYIGRLKRGFRLVRKHQILYPLAIYCIFMNFAAAPW 246
..:.|:|..:.|||||..||||||.||:.|:|||||||||||||.||:||
BL03929___yvq 195 TRTHSQSKSLAQRGTYFARLKRGFTLVKNHKILYPLAIYCIFMNLAASPW 244
BSNT_04935___ 247 EALSAVYVAEDLNGEPIVYSLLKATTAGGAFLLGFVLAKVKVNRYGLLFV 296
||||||||||||||.|.::||||||||||||||||:|||||:|||||||:
BL03929___yvq 245 EALSAVYVAEDLNGTPFIHSLLKATTAGGAFLLGFILAKVKINRYGLLFI 294
BSNT_04935___ 297 TAGIIEGFAFFITGMNTFLPLVFFAAFTFGAAVSAVNVPEYTIIQTSVDS 346
||||:||.|:||.|:||||||||.|||.||||:|::||||:|||||||:.
BL03929___yvq 295 TAGILEGAAYFIAGLNTFLPLVFLAAFAFGAAISSINVPEFTIIQTSVEG 344
BSNT_04935___ 347 EDQPQVYAVIHMISNISIPAGAVICGYAANAFGSGTVIAAGGIVEIIAGI 396
:|||||:||||||:|:|:|.||:.|||||...|:|.|||.||.:||||||
BL03929___yvq 345 DDQPQVFAVIHMITNLSLPLGAIACGYAAKMLGAGNVIAIGGFIEIIAGI 394
BSNT_04935___ 397 GILLFTKLAKAERSDLIKEREASVHL 422
|||:||:||:|.|||||||:|||.::
BL03929___yvq 395 GILIFTQLARARRSDLIKEKEASANM 420
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.