Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05740 and BL03918
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:50
# Commandline: needle
# -asequence pep-align/BSNT_05740___ywhC.1.5803.seq
# -bsequence pep-align/BL03918___ywhC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05740___ywhC-BL03918___ywhC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05740___ywhC-BL03918___ywhC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05740___ywhC
# 2: BL03918___ywhC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 229
# Identity: 143/229 (62.4%)
# Similarity: 185/229 (80.8%)
# Gaps: 10/229 ( 4.4%)
# Score: 810.0
#
#
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BSNT_05740___ 1 ----------MDRFLYYPLSLMPYLVITLIVSFTMHELAHAYVAYKFGDD 40
:||||.|||.::||:|:||..:||:||:|||||||||||:
BL03918___ywh 1 MYMRKRESHILDRFLIYPLEMIPYVVLTLAAAFTVHEVAHAYVAYKFGDE 50
BSNT_05740___ 41 TAKKQGRLTLNPIKHLDPFGTILILVAGFGWARPIPVNRRFFKKPRLAGV 90
|||:||||||||:|||||||||||.:.|||||:|:||||.:||.|||||.
BL03918___ywh 51 TAKRQGRLTLNPLKHLDPFGTILIFILGFGWAKPVPVNRFYFKNPRLAGF 100
BSNT_05740___ 91 LVSIAGPVSNLILAFIGFFLLVLMHAYGMEMLAAFSTGLDQFFSIWIQLN 140
|||||||:||||||||||.||:|.......:.|.|.:||.|||:||:.||
BL03918___ywh 101 LVSIAGPISNLILAFIGFILLLLSVKLSGTLPAGFYSGLLQFFTIWVNLN 150
BSNT_05740___ 141 LVLFLFNLLPLPPLDGYRIIEDLVPPGVRAKMTQAESYGFIVFLVLFVTP 190
|:||||||:|.|||||:|:|:|:|.|.||||:::.|:||.||||::.:||
BL03918___ywh 151 LLLFLFNLMPFPPLDGFRVIQDVVAPEVRAKLSKYEAYGSIVFLIIVITP 200
BSNT_05740___ 191 LGSYVLWPMLNAGRDSILKLFSAIFQPLL 219
||.||.||.||.||:.|:.:|:::|:||:
BL03918___ywh 201 LGQYVFWPFLNDGRELIISIFNSVFRPLM 229
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