Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01388 and BL03903
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:54
# Commandline: needle
# -asequence pep-align/BSNT_01388___yfiN.1.5803.seq
# -bsequence pep-align/BL03903___yfiN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01388___yfiN-BL03903___yfiN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01388___yfiN-BL03903___yfiN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01388___yfiN
# 2: BL03903___yfiN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 406
# Identity: 101/406 (24.9%)
# Similarity: 190/406 (46.8%)
# Gaps: 46/406 (11.3%)
# Score: 298.5
#
#
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BSNT_01388___ 1 MKKILAICGIELSLIFKKPQNYLIMFAAPLLLTFVFGSMLS-GNDDK--V 47
||::|.:....|::.|||..|..:....|||..|| |:|: |:.:| :
BL03903___yfi 1 MKEMLWLVKNTLNVTFKKKINIFLFVCLPLLGIFV--SLLTEGSMEKTDL 48
BSNT_01388___ 48 RLAIVDQDDTILSQHYIRQLKAHDNMYTFESMSENKASDKLKQKKIAGII 97
|:.|::.|...:::.....||..:|: ...::||.:...::...::..:|
BL03903___yfi 49 RVGIINHDGGRIAEDTKDFLKGIENV-NISAVSEAEGKSQVAAGELDCVI 97
BSNT_01388___ 98 VISRSFQTQLEKGK--HPELIFRHGPELSEAPMVKQYAESTLATLNIQVT 145
...:.|...::.|: |..:....|.|:: ..||.|....:. .:.
BL03903___yfi 98 TFEQGFSQSVQSGEPAHIAIASVKGAEIT--GFVKSYVYHYID----NIA 141
BSNT_01388___ 146 AAKTAAQTAGESWKAAYKTVFAKKHEDSAPAVKRQTLSDKKEGAEASDTA 195
|...:||...:.::..| |.:.:|..:||..|:.|. |:..:..
BL03903___yfi 142 AIGKSAQGNEKRFEEMY-----KNYRNSETSVKTSTIEDT---AKNRNMT 183
BSNT_01388___ 196 SRAAGFSILFVMLTMMGAAGTILE----ARKNGVWSRLLTASV-SRVEIG 240
.|..| |:::.|:.:||::.| .::|..:.||||..: :|..:.
BL03903___yfi 184 ERTVG----FLLMAMLFSAGSLTELLVKEKENRTYFRLLTTPITARQYVM 229
BSNT_01388___ 241 AGYVLSFFVIGWIQFGILLLSTHWL---IGINWGNPAAVIVLVSLFLLTV 287
:...:|..||....|..|::..:.. .||::...|||:: :|.|:.
BL03903___yfi 230 SNVAVSMSVITCQTFLTLIMVKYVFRMETGISFWEMAAVLL---IFALSA 276
BSNT_01388___ 288 VGIGLMIAANVRTPEQQLAFGNLFVIATCMVSGMYWPIDIEPKFMQSIAE 337
||:.|:......:........||..:.|.|:||.:||::|.|.|.|.||:
BL03903___yfi 277 VGLALITVVFANSSRSSGVLRNLIFMPTIMLSGCFWPVEIMPSFAQRIAD 326
BSNT_01388___ 338 FLPQKWAMSGLTEIIANGARVTDILGICGILLAFAAITFAAGLKALRA-- 385
||||:|.:..|.: :..|.::..:.....||.||||:.|...:...:.
BL03903___yfi 327 FLPQRWVLDTLAK-LQEGQQLQGLYLNIMILFAFAAVFFLIVIYKFKRNN 375
BSNT_01388___ 385 ------ 385
BL03903___yfi 376 DVRNFA 381
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