Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01387 and BL03902
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:54
# Commandline: needle
# -asequence pep-align/BSNT_01387___yfiM.1.5803.seq
# -bsequence pep-align/BL03902___yfiM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01387___yfiM-BL03902___yfiM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01387___yfiM-BL03902___yfiM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01387___yfiM
# 2: BL03902___yfiM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 420
# Identity: 104/420 (24.8%)
# Similarity: 170/420 (40.5%)
# Gaps: 71/420 (16.9%)
# Score: 260.0
#
#
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BSNT_01387___ 1 MKKSIWIAWKDVKIRITDRKGFMMLILMPLILTCILGAALGSVVDGGSRI 50
..::.||.|::.....|::.|:.::..|::|..|||.||.:..|..:.:
BL03902___yfi 1 -MNTLIIAKKEIVSAFRDKRTFLFMLAFPIVLIMILGTALTNAFDQQAAV 49
BSNT_01387___ 51 DDIKVGYIQSDQSDAANMFTKGVLKKMKSIKVTKAGSEDKMKKLL---DE 97
.:::|.| .|.||.| |::|....:|..|. |....||:| ||
BL03902___yfi 50 GEVRVLY--KDNSDGA--FSQGFKTFVKEAKT----SGVHFKKVLSDMDE 91
BSNT_01387___ 98 KK------IDVGIVIPNHWEAGKTSAVVYATPDQTLKSSIIETAASSFIE 141
|: .|..:.|.| :...:|.....::|:|||:...::|..
BL03902___yfi 92 KQEIKQGNYDAYLEIEN------SGIKLYQMDKNSMKNSIIQGMLTAFAN 135
BSNT_01387___ 142 QYKAVKEAASASMDYISKTEAVKQGKLDPAQFAEKLAKALEKETGDKLTI 191
:|.|..|...|: |.|....|..| .||.. |
BL03902___yfi 136 RYNAAAEIIKAA----------------PEQAGAVLGDA----PGDNY-I 164
BSNT_01387___ 192 AEKSVGS-KAVTSFQYYSAAMLCMFMLFHMTVGAKSFLQEKDTETLARML 240
.|.|:.| :..:|..||:.||..:..|:.....:.....|:..:|..|::
BL03902___yfi 165 KETSLSSDRKPSSMDYYAVAMTTLIALYSALSASYLIRGERLRKTADRLI 214
BSNT_01387___ 241 MPPAQKSVILFGKWLGTYLFAIIQFFIFLIVTINVFGVDWGGNL------ 284
..|..|..|..||.:|..:...:..|..:.|:..||...||.:|
BL03902___yfi 215 AAPVHKGEIFAGKLIGNLVTNGLCIFAVVAVSKYVFKAYWGEHLGLVAAV 264
BSNT_01387___ 285 -----LFVSVLGLSYAAAVSGISMLLASFLSDMKSADAIGGFGIQLLAVL 329
||...||| |:|.|..: .::|.||....|.|:|..
BL03902___yfi 265 LFSIVLFAVCLGL-------GVSYLTRT----GEAAVAIINVLIPLVAFF 303
BSNT_01387___ 330 GGSMLPLYQFPDVLQSISKAVPNRWALDGFLSLMEGGGWADLQKPVLLFA 379
||:..|:.....||..|:...|..|..:..::::.....|.....:||..
BL03902___yfi 304 GGAYFPVDDAEGVLALITDLSPLAWTNEAIMNIIFADDLAAGLPAILLNI 353
BSNT_01387___ 380 AIGFCSLAIGIRRLHTR--- 396
.:....|.|.:..|..|
BL03902___yfi 354 GLSLLFLLIAVVSLQRREGL 373
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