Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01385 and BL03901

See DNA alignment / Visit BSNT_01385 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:54
# Commandline: needle
#    -asequence pep-align/BSNT_01385___yfiL.1.5803.seq
#    -bsequence pep-align/BL03901___yfiL.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01385___yfiL-BL03901___yfiL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01385___yfiL-BL03901___yfiL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01385___yfiL
# 2: BL03901___yfiL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity:     143/315 (45.4%)
# Similarity:   203/315 (64.4%)
# Gaps:           8/315 ( 2.5%)
# Score: 693.0
# 
#
#=======================================

BSNT_01385___      1 --MLQAENIKKAYGKKTIVKGISFSLQKGESFGLLGPNGAGKSTTISMIS     48
                       :|:..::.|.:|....|..||.|:::||.|||||.|||||||||.|||
BL03901___yfi      1 MNVLEIHHLTKKFGDFVAVDNISLSIEEGEIFGLLGANGAGKSTTIHMIS     50

BSNT_01385___     49 GLVPHDSGNITVGGYVIGKETAKAKQKIGIVPQEIALYPTLTAHENLMFW     98
                     .|:..:.|.||:.|..|.|....||..||||||::|:|..|||:.|:.|:
BL03901___yfi     51 SLLRSNEGEITILGKNIAKHRKFAKMNIGIVPQDLAIYEDLTAYANVKFF    100

BSNT_01385___     99 GKMYGLTHGEAKKRSAEVLEYVGLTERAKDKIETFSGGMKRRINIGAALM    148
                     ..:|||.......|..|.|::|||:::.|...:.||||||||:||..|:.
BL03901___yfi    101 AGLYGLRGAHLHNRVEEALQFVGLSDKHKSFPKNFSGGMKRRLNIACAIA    150

BSNT_01385___    149 HKPELLIMDEPTVGIDPQSRNHILETVKKLNETGMTVIYTSHYMEEVEFL    198
                     |:|:|:|||||||||||.|||:|||:|||||..|.|:|||||||||||.:
BL03901___yfi    151 HRPKLIIMDEPTVGIDPHSRNYILESVKKLNAMGCTIIYTSHYMEEVEEI    200

BSNT_01385___    199 CDRIGIIDQGEMIAIGTKTDLCSRLGGDTIIQLTVSGIDEAFLLAIRSLA    248
                     |.||.|:|.|::||.|||..|.|.:.....||:.:...:...:..:::::
BL03901___yfi    201 CTRIAIVDHGKIIAEGTKEQLKSIITNTKDIQVVLKSAENIDIGELKTIS    250

BSNT_01385___    249 HVNDVTVQESELKI--DISAAHHEKVVTSLLAEAAAHHINLLSLQVQEPN    296
                     .|....::::.:||  |....:..:::..|:...|    .:.||:.:.||
BL03901___yfi    251 GVEAAVLEDNTIKINSDAGVNNLNQIIEKLMKNGA----EIRSLEEKAPN    296

BSNT_01385___    297 LERLFLNLTGRTLRD    311
                     ||.:||.||||.|||
BL03901___yfi    297 LETVFLTLTGRQLRD    311


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