Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01380 and BL03900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:54
# Commandline: needle
# -asequence pep-align/BSNT_01380___yfiJ.1.5803.seq
# -bsequence pep-align/BL03900.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01380___yfiJ-BL03900.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01380___yfiJ-BL03900.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01380___yfiJ
# 2: BL03900
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 422
# Identity: 98/422 (23.2%)
# Similarity: 170/422 (40.3%)
# Gaps: 93/422 (22.0%)
# Score: 276.0
#
#
#=======================================
BSNT_01380___ 1 ----------------MYLSIVKE-DN--W-----FGYVFIAAGAAMYAA 26
:|..:..| || | ..||.|..|.|
BL03900 1 MELRIMTGKLILLGFIIYQCVFSESDNLPWLVFSLLVYVCINLGIA---- 46
BSNT_01380___ 27 NHVLLTKETNAIWFCLIDIAIGF-SFGFIFPGTGLFIIM----LCPVAVA 71
:|.|......|.:|.:.|.. |:..:.| |||:. ||..|..
BL03900 47 ---ILPKGKTKKLFIIISVIISIVSYAEVHP---LFILFLPFTLCEGAAD 90
BSNT_01380___ 72 FFLRGFPKRTAWSVLC--LCSILFLIVLI-RTYAMFGNEFVIDHLTSMTF 118
| |.|| |:||. :..:||:...| ..||: ..:..|
BL03900 91 F---GLPK---WAVLAASIVPVLFINESISAVYAL---------TAAFQF 125
BSNT_01380___ 119 VVFCGVV--GKLIRKLLDAQDTAKQQFQELTESHLALSAAHQELHLYAKQ 166
:::.... ...|.||....|..::..|:||. :...::| :.:|
BL03900 126 LLYWAASHDAARIEKLEHHIDQTRRDLQKLTN----MLRENKE---FIRQ 168
BSNT_01380___ 167 VEELTAIYERNRMAREIHDTVGHKMTALLVQLQLLREWQKRDSKKADETV 216
.|....:.||||:::||||.:||.||..|:||:..:.....|.:||.|.:
BL03900 169 SEYTYKLEERNRLSQEIHDKIGHSMTGALIQLEAAKRVLDIDKEKASELL 218
BSNT_01380___ 217 GVCETLAREALDDVRLSVRTLQTENDPSLIESLKQLTEDFCKNAGVTTEF 266
.....::::.::::||::::::..::...|..|:...::......:...|
BL03900 219 QNAINISKDGIENIRLTLKSVKPPSEQMGIHRLRLFIDECSAQYHMNISF 268
BSNT_01380___ 267 AVNGDPAIIPLSLHPTLIRTVQEALTNAKRHGGAAACSIQLACTTDSISL 316
...||..:|.......:...:.|||||:.::..|...||.:......|..
BL03900 269 LHKGDLDVISQIQWKIIFENITEALTNSVKYAEATHVSICIHVLNTLIKA 318
BSNT_01380___ 317 VIKDDGKGNPEAALGFGLLNMKKRAAEHGGTIRFESERDQGFTVNA---- 362
.:||:|||..:...|.|::.|::|||...|.:..:. ..||:|..
BL03900 319 EVKDNGKGRQKIKKGMGIIGMEERAASVNGKVIVDG--SNGFSVTTLLPK 366
BSNT_01380___ 363 -EFSLANKKWSFGPVQQKESLS 383
|
BL03900 367 HE-------------------- 368
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