Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01381 and BL03899
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:54
# Commandline: needle
# -asequence pep-align/BSNT_01381___yfiK.1.5803.seq
# -bsequence pep-align/BL03899___yfiK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01381___yfiK-BL03899___yfiK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01381___yfiK-BL03899___yfiK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01381___yfiK
# 2: BL03899___yfiK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 224
# Identity: 82/224 (36.6%)
# Similarity: 132/224 (58.9%)
# Gaps: 16/224 ( 7.1%)
# Score: 372.0
#
#
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BSNT_01381___ 1 -MIKIIITDDQDIVREGLASLLQLREELDVIATARNGQEAFEKAKELEPD 49
.||:||.||...:|||:..:|...:|.:|:||..:|.:|.|..:....|
BL03899___yfi 1 MKIKVIIADDNSFIREGMKIILSTYDEFEVLATVEDGLQAVEFCRAQAVD 50
BSNT_01381___ 50 IVLMDIRMPVSNGVEGTKLITSSLPGVKVLMLTTFKDSELIAEALEEGAS 99
|.|:|:|||..:|||..:||:.: |.|..:||||.|.|.|..|:..||.
BL03899___yfi 51 IALLDVRMPNMDGVEAARLISET--GAKPFILTTFDDDEYIVAAIRNGAK 98
BSNT_01381___ 100 GYLLKDMSADTIVKAVMTVHSGGMVLPPELTAQMLNEWKREKQLKGINEI 149
|||||:...:.|..|:.:|.:|.:|:...:..::.:.....|:
BL03899___yfi 99 GYLLKNAEPERIRDAIKSVFNGHIVMQDIILDKIKSNLAEHKE------- 141
BSNT_01381___ 150 EKPKELLD---LTEREIEVLAELGYGLNNKEIAEKLYITEGTVKNHVSNI 196
.:|| :| .||||:.::|.:..||:||||:::|:|:|||:.|::|:|
BL03899___yfi 142 AEPK--IDESLFTERELGIMALIARGLSNKEISKELFISEGTIANYISSI 189
BSNT_01381___ 197 ISKLAVRDRTQAAIYSVRYGVSVF 220
:.|..:..|||.|||.:...|:.
BL03899___yfi 190 LGKTGLEHRTQIAIYYLTGKVNF- 212
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