Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05806 and BL03898

See DNA alignment / Visit BSNT_05806 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:52
# Commandline: needle
#    -asequence pep-align/BSNT_05806___ywdK.1.5803.seq
#    -bsequence pep-align/BL03898___ywdK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05806___ywdK-BL03898___ywdK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05806___ywdK-BL03898___ywdK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05806___ywdK
# 2: BL03898___ywdK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 123
# Identity:      99/123 (80.5%)
# Similarity:   114/123 (92.7%)
# Gaps:           0/123 ( 0.0%)
# Score: 535.0
# 
#
#=======================================

BSNT_05806___      1 MKVFIILGAINALLAVGLGAFGAHGLEGKIPDKYLQVWHTGVQYHMYHAL     50
                     ||:|:||||:||:|||.||||||||||||||:||||:|.|||||||||||
BL03898___ywd      1 MKLFLILGAVNAMLAVALGAFGAHGLEGKIPEKYLQIWQTGVQYHMYHAL     50

BSNT_05806___     51 GLFVVAFLADKLSGIGSVTTAGWLMFAGIVLFSGSLYILSVTQISILGAI    100
                     ||..||.:|.||:|.|||:.|||||||||||||||||:||:||||:||||
BL03898___ywd     51 GLIAVALIASKLAGAGSVSAAGWLMFAGIVLFSGSLYVLSLTQISVLGAI    100

BSNT_05806___    101 TPLGGVAFIISWIMIVVAAVKYL    123
                     |||||||||.:|||:||:|||||
BL03898___ywd    101 TPLGGVAFIAAWIMVVVSAVKYL    123


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