Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05807 and BL03897
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:52
# Commandline: needle
# -asequence pep-align/BSNT_05807___ywdJ.1.5803.seq
# -bsequence pep-align/BL03897___ywdJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05807___ywdJ-BL03897___ywdJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05807___ywdJ-BL03897___ywdJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05807___ywdJ
# 2: BL03897___ywdJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 440
# Identity: 303/440 (68.9%)
# Similarity: 370/440 (84.1%)
# Gaps: 7/440 ( 1.6%)
# Score: 1560.0
#
#
#=======================================
BSNT_05807___ 1 MKLVLGALQWTAFIIAAAIVVPVAVAQSFHLDHSDSARLIQSTFFVLGIA 50
|||:.|||||||||||:|||||:|:.|||.|:..::|.|:||||||||..
BL03897___ywd 1 MKLLFGALQWTAFIIASAIVVPIAIGQSFGLNQGETAGLVQSTFFVLGTT 50
BSNT_05807___ 51 AVIQCLKGHRLPINESPAGLWWGVYTIYAGLTGTVFATYGDTLRGLQGAL 100
|.||||.|||||||||||||||||||||||||||||||:.:||:|||||:
BL03897___ywd 51 AFIQCLLGHRLPINESPAGLWWGVYTIYAGLTGTVFATHIETLQGLQGAM 100
BSNT_05807___ 101 LVSAVCFFLLSVFKVIDRLAKLFTPVVTGVYLLLLVMQLSQPIIKGILGI 150
|:|||.||:.|:|||||:||.:|||||||:||||||:|||.||:||::||
BL03897___ywd 101 LLSAVFFFIFSLFKVIDKLAVMFTPVVTGIYLLLLVIQLSDPIVKGVMGI 150
BSNT_05807___ 151 GYRQDGVDGLVFGLALVVIAAAFIMTNSNIMFFKQYSILFALFGGWVLFA 200
|||::.||..||.||:|::.|.|:|:.||:...||||||.||||||:|||
BL03897___ywd 151 GYRKNEVDIPVFLLAVVIMLATFLMSRSNVPILKQYSILIALFGGWILFA 200
BSNT_05807___ 201 AAGAAKPIEMPDRLFQLPSLFPFGTPLFNSGLIITSIFITILLIVNMLAS 250
..|.||..|..::||.||.:||||.|:|:|||::||:|||:|||||||||
BL03897___ywd 201 VFGVAKAPERANQLFHLPDIFPFGMPMFDSGLVVTSLFITVLLIVNMLAS 250
BSNT_05807___ 251 MKVVDIAVKKFSKQPDGKHHERHAGFAASFSHLLSGLTGAIAPVPISGAA 300
::||:.|||:|.|..:.| ..|.|||.||.|||||||.||:..|||||||
BL03897___ywd 251 IRVVEGAVKQFEKLEERK-RARPAGFIASVSHLLSGLLGAVGTVPISGAA 299
BSNT_05807___ 301 GFIETTKMPSKKPFMLGSILVIVISVIPFFMNTFASLPSPVGFAVNFVVF 350
|||:||:|.|||||:|||::|||||..|..||||||||||||||||||||
BL03897___ywd 300 GFIQTTRMSSKKPFLLGSLIVIVISFFPLVMNTFASLPSPVGFAVNFVVF 349
BSNT_05807___ 351 SAMGGLAFAEFDSYEKEESKRVRSIIGISLLTGVGIMFVPETALKGLHPV 400
|.|.||||||||||||:|:.|:|.:.||:||.|||:|||||:||:|:|||
BL03897___ywd 350 STMVGLAFAEFDSYEKDEAGRIRFVTGIALLAGVGVMFVPESALEGMHPV 399
BSNT_05807___ 401 FISLLSNGLVLGTLAAIAADQFQLWRRRKSDNLVSTENKH 440
|:|:|||||||||:.||||:|.|| |::|.||:||
BL03897___ywd 400 FVSILSNGLVLGTIVAIAAEQIQL-RKKKYDNIVS----- 433
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