Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05809 and BL03896

See DNA alignment / Visit BSNT_05809 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:53
# Commandline: needle
#    -asequence pep-align/BSNT_05809___ywdI.1.5803.seq
#    -bsequence pep-align/BL03896___ywdI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05809___ywdI-BL03896___ywdI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05809___ywdI-BL03896___ywdI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05809___ywdI
# 2: BL03896___ywdI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 109
# Identity:      63/109 (57.8%)
# Similarity:    84/109 (77.1%)
# Gaps:          11/109 (10.1%)
# Score: 323.5
# 
#
#=======================================

BSNT_05809___      1 MNIHISALIQKMEEELKKAKTAERDEELKRYVAVVRSLCDVVLDQPENVS     50
                     ||||||:|:||||:||||||...::.|||.::||:||||||:::      
BL03896___ywd      1 MNIHISSLLQKMEDELKKAKECHQENELKMHIAVIRSLCDVIVE------     44

BSNT_05809___     51 APRIQPSVTPSP----AAPPSTDQLMMEKMMGSAGLNKFRKQEKEKQEED     96
                      |:..|||..||    |..||:||||:||||||||..:::||||:|.|:|
BL03896___ywd     45 -PQQGPSVQSSPYVQTANKPSSDQLMLEKMMGSAGAEQYKKQEKQKHEDD     93

BSNT_05809___     97 GNGESLFDF    105
                     |||:|:|||
BL03896___ywd     94 GNGDSIFDF    102


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