Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05817 and BL03892
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:53
# Commandline: needle
# -asequence pep-align/BSNT_05817___sacA.1.5803.seq
# -bsequence pep-align/BL03892___sacA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05817___sacA-BL03892___sacA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05817___sacA-BL03892___sacA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05817___sacA
# 2: BL03892___sacA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 479
# Identity: 296/479 (61.8%)
# Similarity: 376/479 (78.5%)
# Gaps: 1/479 ( 0.2%)
# Score: 1690.0
#
#
#=======================================
BSNT_05817___ 1 MTAHDQELRRRAYEEVEKKEPIADSDPHRQHFHIMPPVGLLNDPNGLIYW 50
...|||||::|...||:...|.:.||:|.|:||||||||||||||.|.|
BL03892___sac 1 -MNQDQELRQKAMNRVEEYRDIVNLDPYRLHYHIMPPVGLLNDPNGFIQW 49
BSNT_05817___ 51 KGSYHVFFQWQPFQTGHGAKFWGHYTTQDVVNWKREEIALAPSDWFDKNG 100
||.||:|:||.||:||||||.||||::.|:|||:.|||||.|||||||||
BL03892___sac 50 KGVYHLFYQWMPFKTGHGAKLWGHYSSADLVNWRHEEIALTPSDWFDKNG 99
BSNT_05817___ 101 CYSGSAVTKDDRLYLFYTGNVRDQDGNRETYQCLAVSDDGLSFEKKGVVA 150
||||||:.::|.|:|||||||||.:||||||||||||.||:||||:||||
BL03892___sac 100 CYSGSAIAENDVLHLFYTGNVRDGEGNRETYQCLAVSKDGISFEKQGVVA 149
BSNT_05817___ 151 RLPEGYTAHFRDPKVWEHEGTWYMVIGAQTENLKGQAVLFASDNLSEWRF 200
|||:||||||||||||:..|:||||:|||||||:|:||||.||||.:|:|
BL03892___sac 150 RLPKGYTAHFRDPKVWKKNGSWYMVLGAQTENLEGRAVLFQSDNLKDWQF 199
BSNT_05817___ 201 LGPITGAGFNGLDDFGYMWECPDLFSLQGSDVLIVSPQGLEADGFRYQNV 250
||.|||:..:.|.:|||||||||:|.|.|.|||||.||||||:...||||
BL03892___sac 200 LGDITGSNTDQLGEFGYMWECPDMFELDGKDVLIVCPQGLEAEEMLYQNV 249
BSNT_05817___ 251 YQSGYFVGCLDYNKPELKHGEFTELDQGFDFYAPQTLEDNQGRRILFAWM 300
||||||||.|:..||...||:|.|||:|||||||||.:|..|||||.|||
BL03892___sac 250 YQSGYFVGELNELKPWFTHGDFEELDRGFDFYAPQTTKDESGRRILVAWM 299
BSNT_05817___ 301 AVPDQDEGSHPTIDYHWIHCMTLPRQLTISGEKLIQQPLPELKAMRRNEK 350
.||||||.|.|||.:.|:|||||||:|.:..:|::|:|:.||:.:|:|||
BL03892___sac 300 GVPDQDEQSQPTIPHQWVHCMTLPRELHLQNDKIVQKPVEELRTLRQNEK 349
BSNT_05817___ 351 KIHINMHGSSGTLPVEKPERAEILLEDIHTESGFSISIRGTATFSFQKDE 400
...|:::..:..|.:.:|::||:.:.....|.||.||.||.|...:.|.|
BL03892___sac 350 NAAISLNQGTEKLDIVQPDKAELFISPKVIEEGFEISFRGAARLIYNKAE 399
BSNT_05817___ 401 GIVTLERKSFDGKRKESRHCRIKDLHTVHMFLDASSVEIFINNGEEVFSA 450
||:||||.|:..::.|:|.||:::|..:::||||||:|||:|.|||||:|
BL03892___sac 400 GIITLERNSYVDEKTEARQCRLQELRNLNIFLDASSIEIFVNEGEEVFTA 449
BSNT_05817___ 451 RYFPFPGNHEVTASSTGKSEMNVLIWTLM 479
||||:|||::|..|:..:..|||..||:.
BL03892___sac 450 RYFPYPGNNDVWISARKEIIMNVTSWTMA 478
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