Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05821 and BL03889

See DNA alignment / Visit BSNT_05821 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:54
# Commandline: needle
#    -asequence pep-align/BSNT_05821.1.5803.seq
#    -bsequence pep-align/BL03889___sacT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05821-BL03889___sacT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05821-BL03889___sacT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05821
# 2: BL03889___sacT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 276
# Identity:     117/276 (42.4%)
# Similarity:   138/276 (50.0%)
# Gaps:         114/276 (41.3%)
# Score: 613.0
# 
#
#=======================================

BSNT_05821         0 --------------------------------------------------      0
                                                                       
BL03889___sac      1 MKIYKVLNNNAAIIKEDGQEKIVMGPGIAFQKGKNDTIPRNKVEKIFTIH     50

BSNT_05821         0 --------------------------------------------------      0
                                                                       
BL03889___sac     51 EENEKFKQILETLPEEHIEAAEEIISYAEGQLSAPLSDHIHIALVDHLSF    100

BSNT_05821         1 --------------MLHEIKALYKKEYEIGLWAIGHVKETLGMSLPEDEA     36
                                   :|:|||||||||||||||||..|||.|.:.||:|||
BL03889___sac    101 AIERVRKGFVIQNKLLNEIKALYKKEYEIGLWAIDLVKEKLKVELPDDEA    150

BSNT_05821        37 GYIALHIHTAKMDAESMYSALKHTTMIKEMIEKIEQYFNRKVDENSISYQ     86
                     |||||||||||||||:|...||:|.:|||:|||||..||:|:||||||||
BL03889___sac    151 GYIALHIHTAKMDAENMQKTLKYTNIIKELIEKIECCFNQKIDENSISYQ    200

BSNT_05821        87 RLVTHLRYAVSRLESNEALHRMDEEMLYFIQKKYSFAYQCALELAEFLKN    136
                     |||||||||::|||||||.|.||::|||||::||..:|:||..||:::|.
BL03889___sac    201 RLVTHLRYAINRLESNEAFHVMDDDMLYFIRQKYPESYRCAAGLADYVKT    250

BSNT_05821       137 EYQLHLPESEAGYITLHVQRLQDLSE    162
                     ||.|||||||.||||||||||.|...
BL03889___sac    251 EYDLHLPESEVGYITLHVQRLNDSYR    276


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