Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05826 and BL03888

See DNA alignment / Visit BSNT_05826 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:54
# Commandline: needle
#    -asequence pep-align/BSNT_05826___ywcH.1.5803.seq
#    -bsequence pep-align/BL03888___ywcH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05826___ywcH-BL03888___ywcH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05826___ywcH-BL03888___ywcH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05826___ywcH
# 2: BL03888___ywcH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 335
# Identity:     237/335 (70.7%)
# Similarity:   275/335 (82.1%)
# Gaps:           2/335 ( 0.6%)
# Score: 1230.0
# 
#
#=======================================

BSNT_05826___      1 MVSLSILDQSPVSEGSNAETALQQTVALAQAAEDLGYKRFWVSEHHFSKR     50
                     |:|||||||:||||||..|.|||.||.||||||.||||||||||||||:.
BL03888___ywc      1 MLSLSILDQTPVSEGSKPELALQHTVELAQAAERLGYKRFWVSEHHFSRN     50

BSNT_05826___     51 LAGSSPEVLISHIAAKTKRIRVGSGGVMLPHYSAYKVAENFRVLEGLTPG    100
                     ||||||||||.::||||::||:|||||||||||||||||||||||||.||
BL03888___ywc     51 LAGSSPEVLIGYLAAKTEKIRIGSGGVMLPHYSAYKVAENFRVLEGLAPG    100

BSNT_05826___    101 RIDLGLGRAPGGMPIASWALNDGGKRNADQYPQQIKELTMYLHDLADDKH    150
                     |||||:|||||||||||.||.:||:|.|||||:||::|..||:|.||:.|
BL03888___ywc    101 RIDLGVGRAPGGMPIASMALQNGGRRMADQYPEQIQDLVTYLYDQADEHH    150

BSNT_05826___    151 RFPNLTAAPHISTAPDVWLLGSSGESALLAAESGAGYMFAHFINGEGGEG    200
                     |||||||.|:|:|||.|||||||||||.|||::||.|.||.||||||||.
BL03888___ywc    151 RFPNLTATPNIATAPAVWLLGSSGESARLAAQTGASYTFAQFINGEGGEE    200

BSNT_05826___    201 TVRQYKRRFKPSVLGDTPRAAVAVFVLCADTEEKAEELGAVLDFTLLAGE    250
                     ..|.||.||:|||||:.|...|||||:||:||||||.|...|||:|||.|
BL03888___ywc    201 AARLYKERFEPSVLGEQPNVIVAVFVICAETEEKAENLAKSLDFSLLANE    250

BSNT_05826___    251 QGIPLEGVPSYEAVRKNTYSPYEQRRIADNRNRMIVGTKEQVKKRLLALS    300
                     ||:..||.||.|......|||||::|:.|||.||::||.:|||::||.|:
BL03888___ywc    251 QGMVTEGFPSLETALSYQYSPYERKRVEDNRKRMVIGTPQQVKEQLLELA    300

BSNT_05826___    301 KAYETEEIMVVTITHHFEDKLRSYRLLQEAFAD--    333
                     .||.|:|||.|||||.|:|:|.|||||.|||..  
BL03888___ywc    301 GAYGTDEIMAVTITHDFQDRLDSYRLLAEAFHQSI    335


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