Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05833 and BL03874

See DNA alignment / Visit BSNT_05833 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:54
# Commandline: needle
#    -asequence pep-align/BSNT_05833___qoxD.1.5803.seq
#    -bsequence pep-align/BL03874___qoxD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05833___qoxD-BL03874___qoxD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05833___qoxD-BL03874___qoxD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05833___qoxD
# 2: BL03874___qoxD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 125
# Identity:      92/125 (73.6%)
# Similarity:   105/125 (84.0%)
# Gaps:           5/125 ( 4.0%)
# Score: 487.0
# 
#
#=======================================

BSNT_05833___      1 -MANKSAEHSHFPWKHIVGFILSIVLTLLALWVAVYTDLSSSAKLWIIFG     49
                      .|.:|||||||||||||||:|||||||||||| :|||||.:||||||||
BL03874___qox      1 MAAKQSAEHSHFPWKHIVGFVLSIVLTLLALWV-IYTDLSMAAKLWIIFG     49

BSNT_05833___     50 FAFIQAALQLLMFMHMTESENGTIQVGNTLFGFFGAIVIVLGSIWIFAAH     99
                     ||.|||.||||||||||||::|.||||||||..|.|:.|:.||:||||||
BL03874___qox     50 FAIIQAGLQLLMFMHMTESDSGKIQVGNTLFAAFIAVAIIAGSVWIFAAH     99

BSNT_05833___    100 YHHGDHMDGNPPGGAEHSEHSGHNE    124
                     .:|||:.:|..| ||:|||||||  
BL03874___qox    100 NYHGDNPEGGSP-GAKHSEHSGH--    121


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