Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05864 and BL03857
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:56
# Commandline: needle
# -asequence pep-align/BSNT_05864___ywbD.1.5803.seq
# -bsequence pep-align/BL03857___ywbD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05864___ywbD-BL03857___ywbD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05864___ywbD-BL03857___ywbD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05864___ywbD
# 2: BL03857___ywbD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 397
# Identity: 291/397 (73.3%)
# Similarity: 340/397 (85.6%)
# Gaps: 3/397 ( 0.8%)
# Score: 1548.0
#
#
#=======================================
BSNT_05864___ 1 MKLLTLKKAHAAKIKKGYPLIEKEALAGSAGHMKEGDIVDIVSESGEFLA 50
|..|.:|...|||:|||||||||||::.....:|||.::.|..|:|.||.
BL03857___ywb 1 MHTLKIKHPFAAKMKKGYPLIEKEAVSSQENGIKEGSLIRITDENGRFLG 50
BSNT_05864___ 51 RGYYGLQNKGVGWTLTRNKHEQIDQAFFLTKLTKAAQARAKLFEAQDTTA 100
:||||.||||:||.||||:.|.|||:|||::|.||.|||..||:..||||
BL03857___ywb 51 KGYYGEQNKGIGWILTRNEGESIDQSFFLSRLAKAFQARKSLFQDPDTTA 100
BSNT_05864___ 101 FRLFNGEGDGVGGVTIDYYDGYLLVQWYSKGIYTFKDMLISALDEMDLDY 150
||||||||||:||.||||||||.|.|||||||||.|:.::.||||: .||
BL03857___ywb 101 FRLFNGEGDGIGGFTIDYYDGYYLFQWYSKGIYTLKETIMEALDEL-TDY 149
BSNT_05864___ 151 KAIYEKKRFDTAGQYVEDDDFVKGKRGEFPIIIQENGIQYAVDLNEGAMT 200
||:||||||:||||||||||||||:||:||||::||||.:||.||:||||
BL03857___ywb 150 KAVYEKKRFNTAGQYVEDDDFVKGERGDFPIIVKENGIHFAVYLNDGAMT 199
BSNT_05864___ 201 GIFLDQRHVRKAIRDRYAKGKTVLNTFSYTGAFSVAAALGGAEKTTSVDV 250
|:||||||||||:|||||:|||.|||||||||||||||||||||||||||
BL03857___ywb 200 GVFLDQRHVRKAVRDRYAEGKTALNTFSYTGAFSVAAALGGAEKTTSVDV 249
BSNT_05864___ 251 ANRSLAKTIEQFSVNKLDYEAHDIKVMDVFNYFSYAEKKDLRFDLIILDP 300
|||||::||||||||.||||||:|||||||.||.||.||:|.|||:||||
BL03857___ywb 250 ANRSLSRTIEQFSVNGLDYEAHEIKVMDVFKYFQYAAKKELAFDLVILDP 299
BSNT_05864___ 301 PSFARTKKRTFSAAKDYKNLLKETIAITADKGVIVASTNSSAFGMKKFKG 350
||||||||.|||||||||||||:.|.||.|:|||||||||||||||||||
BL03857___ywb 300 PSFARTKKHTFSAAKDYKNLLKDAIRITKDQGVIVASTNSSAFGMKKFKG 349
BSNT_05864___ 351 FIDAAFKETNERYTIIEEFTLPKDFKTISAFPEGNYLKVVLLQKK-- 395
||:.|.|||..|:|::||.:||:||||:.::|||:|||||.||.:
BL03857___ywb 350 FIEEACKETGTRFTVLEEHSLPEDFKTVKSYPEGDYLKVVFLQVRHR 396
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