Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05884 and BL03845
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:57
# Commandline: needle
# -asequence pep-align/BSNT_05884___ywaC.1.5803.seq
# -bsequence pep-align/BL03845___ywaC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05884___ywaC-BL03845___ywaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05884___ywaC-BL03845___ywaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05884___ywaC
# 2: BL03845___ywaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 219
# Identity: 165/219 (75.3%)
# Similarity: 195/219 (89.0%)
# Gaps: 9/219 ( 4.1%)
# Score: 894.5
#
#
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BSNT_05884___ 1 MDLSVTHM--------DDLKTVMEDWKNELLVYKFALDALDTKFSIISQE 42
||:::..| :||:.:||||||||||||||||.:||||||||||
BL03845___ywa 1 MDMAIDKMIGLPEAQIEDLRNLMEDWKNELLVYKFALDQMDTKFSIISQE 50
BSNT_05884___ 43 YNLIHGHNPIEHTKSRVKSFESIVNKLMRKGCEITTKEMKEHIHDIAGVR 92
||||||||||||||||||||||::|||:||||:||||..||||:||||:|
BL03845___ywa 51 YNLIHGHNPIEHTKSRVKSFESLINKLVRKGCDITTKAAKEHINDIAGLR 100
BSNT_05884___ 93 IICSFISDIYNVVNVLKQHEDLRIVKVKDYIQTPKPNGYRSLHLIIEMPV 142
|:|||:|||||:|.|||:|||::|:|:||||:.||||||||||||:|:||
BL03845___ywa 101 IVCSFLSDIYNMVEVLKEHEDIKILKMKDYIKNPKPNGYRSLHLIVEVPV 150
BSNT_05884___ 143 NLTNRVEYVKAEIQIRTIAMDFWASLEHKIYYKLNNDVPKQLTDELKEAA 192
.||||||:.|.|||||||||||||||||||||||||:||.||||||||||
BL03845___ywa 151 YLTNRVEHAKVEIQIRTIAMDFWASLEHKIYYKLNNEVPNQLTDELKEAA 200
BSNT_05884___ 193 EIAHYLDEKMLGIKKEVD- 210
:||:|||||||.|:.:.|
BL03845___ywa 201 DIANYLDEKMLHIRTKADQ 219
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