Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05884 and BL03845
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:57
# Commandline: needle
# -asequence dna-align/BSNT_05884___ywaC.1.5803.seq
# -bsequence dna-align/BL03845___ywaC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05884___ywaC-BL03845___ywaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05884___ywaC-BL03845___ywaC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05884___ywaC
# 2: BL03845___ywaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 664
# Identity: 468/664 (70.5%)
# Similarity: 468/664 (70.5%)
# Gaps: 35/664 ( 5.3%)
# Score: 1604.0
#
#
#=======================================
BSNT_05884___ 1 ATGGAT----------------TTAT--------CTGTAACACATATGGA 26
|||||| |.|| |||.|.|.||.||.||
BL03845___ywa 1 ATGGATATGGCGATAGATAAGATGATAGGACTGCCTGAAGCCCAGATAGA 50
BSNT_05884___ 27 CGATTT-AAAAACAGTAATGGAAGATTGGAAAAATGAATTATTAGTTTAT 75
.||||| |.|||| .|.|||||.||.|||||.||.|||.|..|.||.|||
BL03845___ywa 51 AGATTTGAGAAAC-CTGATGGAGGACTGGAAGAACGAACTCCTCGTCTAT 99
BSNT_05884___ 76 AAATTTGCGCTAGATGCGCTCGATACAAAGTTCTCAATTATCAGCCAGGA 125
||||||||..|.|||....|.|||||.|||||.||.||||||||||||||
BL03845___ywa 100 AAATTTGCCTTGGATCAAATGGATACGAAGTTTTCGATTATCAGCCAGGA 149
BSNT_05884___ 126 ATATAACCTCATTCACGGACACAACCCGATTGAACATACAAAATCCCGTG 175
||||||..|.||||||||.||||||||||||||||||||.|||||..|.|
BL03845___ywa 150 ATATAATTTAATTCACGGCCACAACCCGATTGAACATACGAAATCAAGGG 199
BSNT_05884___ 176 TCAAAAGCTTTGAAAGCATCGTGAATAAGTTAATGAGAAAGGGCTGTGAG 225
|.|||||||||||||||.|..|.||.|||.|..||.|.||||||||.||.
BL03845___ywa 200 TGAAAAGCTTTGAAAGCCTGATTAACAAGCTTGTGCGGAAGGGCTGCGAT 249
BSNT_05884___ 226 ATTACGACGAAGGAAATGAAGGAGCATATTCACGACATTGCCGGCGTGCG 275
||||||||.||||.....||||||||.||..|.||.||.|||||..|..|
BL03845___ywa 250 ATTACGACAAAGGCCGCTAAGGAGCACATCAATGATATCGCCGGTCTCAG 299
BSNT_05884___ 276 CATCATCTGTTCCTTTATTTCTGACATTTATAATGTCG-TGAATGTGTTG 324
.|||.||||.||.|||.|.||.||||||||.|||.|.| |||| |||.||
BL03845___ywa 300 AATCGTCTGCTCGTTTTTATCCGACATTTACAATATGGTTGAA-GTGCTG 348
BSNT_05884___ 325 AAGCAGCATGAAGATTTGAGAATCGTAAAGGTAAAGGATTATATCCAGAC 374
|||.|.||||||||..|.|.|||..||||..|.|||||.||.||..|.|.
BL03845___ywa 349 AAGGAACATGAAGACATCAAAATTTTAAAAATGAAGGACTACATTAAAAA 398
BSNT_05884___ 375 ACCCAAACCGAATGGCTATCGAAGCCTGCATTTAATCATTGAGATGCCTG 424
.||.||.|||||.||.||..|.||.||.||.|||||..|.||..||||.|
BL03845___ywa 399 TCCGAAGCCGAACGGATACAGGAGTCTTCACTTAATTGTAGAAGTGCCCG 448
BSNT_05884___ 425 TGAATTTAACGAACCGTGTGGAATACGTCAAAGCAGAAATTCAAATCCGG 474
|..|.||.||.|||||.||.||..|||.|||.|..||.|||||||||.||
BL03845___ywa 449 TTTACTTGACCAACCGCGTCGAGCACGCCAAGGTGGAGATTCAAATCAGG 498
BSNT_05884___ 475 ACAATCGCGATGGATTTCTGGGCGAGCCTTGAACATAAAATTTATTATAA 524
||.||||||||||||||||||||||||||.||.||||||||.||.||.||
BL03845___ywa 499 ACGATCGCGATGGATTTCTGGGCGAGCCTCGAGCATAAAATCTACTACAA 548
BSNT_05884___ 525 ATTGAACAATGACGTTCCTAAGCAATTAACAGATGAGCTGAAGGAAGCCG 574
||||||||||||.||.||.||.||..|.||.|||||||||||.|||||.|
BL03845___ywa 549 ATTGAACAATGAAGTGCCGAACCAGCTCACTGATGAGCTGAAAGAAGCGG 598
BSNT_05884___ 575 CGGAGATTGCCCATTACCTAGATGAGAAAATGCTGGGGATT--AAGAAAG 622
|.||.||.||..|.|||.|.|||||.||.|||||....||| ||.||
BL03845___ywa 599 CTGACATCGCGAACTACTTGGATGAAAAGATGCTTCATATTCGAACAA-- 646
BSNT_05884___ 623 AAGTGGATTAG--- 633
|||.||||.|.
BL03845___ywa 647 AAGCGGATCAATAA 660
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