Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02118 and BL03835

See DNA alignment / Visit BSNT_02118 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:36
# Commandline: needle
#    -asequence pep-align/BSNT_02118___xkdB.1.5803.seq
#    -bsequence pep-align/BL03835___xkdB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02118___xkdB-BL03835___xkdB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02118___xkdB-BL03835___xkdB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02118___xkdB
# 2: BL03835___xkdB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     153/286 (53.5%)
# Similarity:   194/286 (67.8%)
# Gaps:          18/286 ( 6.3%)
# Score: 746.5
# 
#
#=======================================

BSNT_02118___      1 --MKNDKSYPFPTYSGLLNSEHYDKMGPALWLFLWFISSTTKEIEKDGVS     48
                       ...|:||||..|||||...||:|:|.|:|||||.|||||||||:||.:
BL03835___xkd      1 MSRPPDQSYPFSVYSGLLTPVHYEKIGNAIWLFLWCISSTTKEIERDGET     50

BSNT_02118___     49 WGIVLGHKPLKAREMAAVFGVSEKTVRRWLELLENHDYIKAVRAPYGLMI     98
                     ||||||:|||||.|:|..|||:|||:||||.|||.:.||...|||||:::
BL03835___xkd     51 WGIVLGNKPLKAAELALQFGVNEKTIRRWLALLERNGYIAVTRAPYGMIL    100

BSNT_02118___     99 SVKHSKKFSFRSDNTVHGSLKERPFSPQTPDTNDRTDIDKTNK-YTAAD-    146
                     ||:|||||::.|.  |...|.:|     |.:|.....:.::|| .|..: 
BL03835___xkd    101 SVRHSKKFAYASH--VRTELPDR-----TEETGSADKLVQSNKDITQINT    143

BSNT_02118___    147 ----DAVDHIAKRFTQLRSAQEGRTVYPSSRDYQAIARIVAIGVPVMQTI    192
                         .::..||:||..|||.|||:.|:|||:||||||||||.||.:.|||
BL03835___xkd    144 KHNMSSIKTIAERFAALRSMQEGKPVHPSSKDYQAIARIVARGVSLPQTI    193

BSNT_02118___    193 KWLEECFQTFENRRTAASETIKAFRYCSKFIEDRFFAQQAKKNAAIQHER    242
                     ||||:||:.:|.||.:..||||.|.||.|:|..|....:||....::.| 
BL03835___xkd    194 KWLEQCFEEYEARRRSRHETIKVFSYCEKYIIGRLAEAEAKTKTTVRRE-    242

BSNT_02118___    243 MKKHDKTNNRTDFGRAEKRETSITGGQTGRIRRKQV    278
                       .:.:.|||...||.||:|.|||||||||||||.|
BL03835___xkd    243 --NNAQKNNRRGHGRTEKQEPSITGGQTGRIRRKTV    276


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