Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02123 and BL03833

See DNA alignment / Visit BSNT_02123 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:36
# Commandline: needle
#    -asequence pep-align/BSNT_02123___xkdD.1.5803.seq
#    -bsequence pep-align/BL03833___xkdD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02123___xkdD-BL03833___xkdD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02123___xkdD-BL03833___xkdD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02123___xkdD
# 2: BL03833___xkdD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 121
# Identity:      55/121 (45.5%)
# Similarity:    72/121 (59.5%)
# Gaps:          13/121 (10.7%)
# Score: 220.0
# 
#
#=======================================

BSNT_02123___      1 MKVLAKTKQAEKSPAPWRAVPCGDTKPIYIYSAYSEEEKERFPYSNGRLI     50
                         .|.:....||:|||.|  .....:|||||||:.||:||.|||||:|
BL03833___xkd      1 ----MKNESEAYSPSPWRVV--RTNTDVYIYSAYSKAEKKRFSYSNGRVI     44

BSNT_02123___     51 AAVFDLSSYSQKSNAALMAAAPELLEASKAALDFLK-GNSVHS---KERI     96
                     |.|.|.|:||::.||.|:|||||||.|.|..|.:|| ...|||   :.::
BL03833___xkd     45 AKVADYSAYSKEKNARLIAAAPELLTAVKLTLAYLKRKRPVHSDSVENQL     94

BSNT_02123___     97 ILLLEKAEASAAPKRGGKET-    116
                     ..:|||..|.|..:.  :|| 
BL03833___xkd     95 KNILEKVVAKAEFEE--EETR    113


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