Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02125 and BL03832

See DNA alignment / Visit BSNT_02125 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:36
# Commandline: needle
#    -asequence pep-align/BSNT_02125___xtrA.1.5803.seq
#    -bsequence pep-align/BL03832___xtrA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02125___xtrA-BL03832___xtrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02125___xtrA-BL03832___xtrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02125___xtrA
# 2: BL03832___xtrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 68
# Identity:      41/68 (60.3%)
# Similarity:    54/68 (79.4%)
# Gaps:           1/68 ( 1.5%)
# Score: 227.0
# 
#
#=======================================

BSNT_02125___      1 MIHPKKLLHIDSITLKSQLEEGKIRVIIVDGIKQEAWITEAPEHGKTLVE     50
                     |.||.||..|:..|:.|::::||:.||::||:...||..||||||||::|
BL03832___xtr      1 MNHPAKLTDINDTTVASRIKKGKVTVIVLDGMNGTAWQAEAPEHGKTVIE     50

BSNT_02125___     51 TRKGDLARVEFEIGYKLN     68
                     ||||||||:|||||||| 
BL03832___xtr     51 TRKGDLARIEFEIGYKL-     67


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.