Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02127 and BL03830

See DNA alignment / Visit BSNT_02127 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:36
# Commandline: needle
#    -asequence pep-align/BSNT_02127___xtmA.1.5803.seq
#    -bsequence pep-align/BL03830___xtmA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02127___xtmA-BL03830___xtmA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02127___xtmA-BL03830___xtmA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02127___xtmA
# 2: BL03830___xtmA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 268
# Identity:     188/268 (70.1%)
# Similarity:   224/268 (83.6%)
# Gaps:           5/268 ( 1.9%)
# Score: 960.0
# 
#
#=======================================

BSNT_02127___      1 ---MKTQQREQALAIYQQHQGKITNRAIADTIGVSAKTIGIWKKQDKWKE     47
                        .:..:|::|..:||::.|.|||.|||..:|||.|.|.:||.:|:|:|
BL03830___xtm      1 MPRKRDPKRDEAFRLYQKYGGNITNLAIARELGVSNKKISVWKTRDRWQE     50

BSNT_02127___     48 ALFSASKNEQKQRPINNDELNERQRLFCLYYVKSFNATQSAIKAGYSPDS     97
                     ||.....|..| ..|:|:.|||||||||:||||||||||:|:||||||.|
BL03830___xtm     51 ALAGDDANRGK-ADIHNEGLNERQRLFCIYYVKSFNATQAAVKAGYSPAS     99

BSNT_02127___     98 AHVTGSRLLKNEKVAAEIRRIKKEMVNEMFIEAMDVLQVYIKIAFADITD    147
                     |||||.|||||||||.||||||||||.|:|:|||||||||:||||||:||
BL03830___xtm    100 AHVTGCRLLKNEKVADEIRRIKKEMVGEIFVEAMDVLQVYVKIAFADMTD    149

BSNT_02127___    148 YVTFGKKEVQAVGKSGPLFDEDDNPIMKEISFVDVKDSGLVDGTIVTEAK    197
                     |||||||||||||||||||||::||:|||:||||||.|.|||||::||||
BL03830___xtm    150 YVTFGKKEVQAVGKSGPLFDEENNPVMKEVSFVDVKHSDLVDGTVITEAK    199

BSNT_02127___    198 LGKEGIAIKLADKMKALEKLSLYFDLFPDQFKQKIENEKLKLAKQKAEKT    247
                     |||||||||||||||||:|||.|||||||.||:||||||||||:|||:| 
BL03830___xtm    200 LGKEGIAIKLADKMKALDKLSQYFDLFPDSFKRKIENEKLKLARQKADK-    248

BSNT_02127___    248 DDSQEPIEIMIKRKERKS    265
                     |....|:|::|.||..::
BL03830___xtm    249 DAETGPVEVVIARKGDQA    266


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