Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02132 and BL03827

See DNA alignment / Visit BSNT_02132 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:37
# Commandline: needle
#    -asequence pep-align/BSNT_02132___xkdF.1.5803.seq
#    -bsequence pep-align/BL03827___xkdF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02132___xkdF-BL03827___xkdF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02132___xkdF-BL03827___xkdF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02132___xkdF
# 2: BL03827___xkdF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 284
# Identity:     172/284 (60.6%)
# Similarity:   216/284 (76.1%)
# Gaps:          11/284 ( 3.9%)
# Score: 866.5
# 
#
#=======================================

BSNT_02132___      1 MARELRNAKISFVSYVDKAANQTEFFFTKSAKPPSFEKKVRLFTKSEQDE     50
                     |.|||:||||:||||||||||:.:||.|||::||:|:|:|:|..|:| ||
BL03827___xkd      1 MPRELKNAKINFVSYVDKAANKKKFFMTKSSEPPTFQKEVKLIAKAE-DE     49

BSNT_02132___     51 QKLVYGIVYEPDVPDAHGDFMTAEEIEKAAHGFLAEAREIDINHSFEGGT    100
                     :|||||:|||||:.||||||||||||:|||||||..||:||.:|:|:||.
BL03827___xkd     50 KKLVYGVVYEPDIQDAHGDFMTAEEIQKAAHGFLKNARKIDKDHNFQGGV     99

BSNT_02132___    101 GVVVESYVAPDDFMIGSKRITKGSWVLVTRASDEVWEQIKAGIITGYSMA    150
                     |.||||||||.||.:..:.|.||||||||:|.||:|||||.|.|||||||
BL03827___xkd    100 GEVVESYVAPADFEVNGETIVKGSWVLVTKAGDEIWEQIKKGSITGYSMA    149

BSNT_02132___    151 GTADVYEEEPV------EKAGFFSVFKQMLA---DKTGKETEEMRKEDMK    191
                     |||:..|..|.      |...||.:|||..|   .|||:|.::|::.:::
BL03827___xkd    150 GTAETVEHAPQADSETDEPGSFFQLFKQFFAGDKQKTGEEEKKMKRSEVQ    199

BSNT_02132___    192 ESFEHALYPLLKRLERIEKNTDTEEKPEQTGDDERLKKLVEDMLAPLIER    241
                     .:.|..|.||||||:.:|.:...:||.:||..|..:|::|||||||||.|
BL03827___xkd    200 GTIEAVLAPLLKRLDDLEGDKAADEKEQQTDQDAHVKEIVEDMLAPLIAR    249

BSNT_02132___    242 IEALELARGASKQTADDTGGNTEQVKKSIWSGLL    275
                     |||||..||||||.|.:..|. |:||||||||||
BL03827___xkd    250 IEALEKMRGASKQAAAEKDGE-EEVKKSIWSGLL    282


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