Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02142 and BL03820

See DNA alignment / Visit BSNT_02142 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:37
# Commandline: needle
#    -asequence pep-align/BSNT_02142.1.5803.seq
#    -bsequence pep-align/BL03820.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02142-BL03820.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02142-BL03820.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02142
# 2: BL03820
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 75
# Identity:      38/75 (50.7%)
# Similarity:    50/75 (66.7%)
# Gaps:           4/75 ( 5.3%)
# Score: 186.0
# 
#
#=======================================

BSNT_02142         1 ---MSKDKQQKKAVHTKSREALFDTADLIKHAKELFGVKPDILQGALFGV     47
                        ..|...:.|....:.|||||...||.:|||||||:||::|.||||.|
BL03820            1 MAVSKKTNTEAKKAPQEEREALFYIEDLREHAKELFGIKPEVLDGALFHV     50

BSNT_02142        48 DQPRMTKSEANQLIQTFLTKEVMSS     72
                     .:.:::|.||:|||||||.||||: 
BL03820           51 KEEQISKPEASQLIQTFLAKEVMN-     74


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