Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02142 and BL03820
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:37
# Commandline: needle
# -asequence dna-align/BSNT_02142.1.5803.seq
# -bsequence dna-align/BL03820.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02142-BL03820.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02142-BL03820.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02142
# 2: BL03820
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 237
# Identity: 148/237 (62.4%)
# Similarity: 148/237 (62.4%)
# Gaps: 30/237 (12.7%)
# Score: 416.5
#
#
#=======================================
BSNT_02142 1 ------GT--GTCAAAGGACAAACAACAGAAG-----AAGGCTGTACATA 37
|| |..|||..|||||| ||.|||| |||||....|
BL03820 1 TTGGCAGTCAGCAAAAAAACAAAC-ACCGAAGCAAAAAAGGCGCCTC--- 46
BSNT_02142 38 CAAAGAG--CCGGGAAGCTCTATTTGATACAGCG--GATTTGATTAAGCA 83
||||| .||.|||||.||.|| .||||.|| ||..|||...||||
BL03820 47 --AAGAGGAACGTGAAGCGCTGTT--CTACATCGAAGACCTGAGGGAGCA 92
BSNT_02142 84 CGCGAAGGAACTGTTCGGCGTTAAGCCGGATATTCTTCAGGGGGCTTTAT 133
||||||.||.||.||||||.||||||||||..||||..|.||.|||.|.|
BL03820 93 CGCGAAAGAGCTTTTCGGCATTAAGCCGGAAGTTCTCGATGGTGCTCTTT 142
BSNT_02142 134 TTGGCGTGGATCAACCACGTATGACGAAATCAGAAGCCAACCAATTGATT 183
||...|||.|..||...|..||..|.|||.|.||.||.|..||..|.|||
BL03820 143 TTCATGTGAAAGAAGAGCAGATTTCAAAACCTGAGGCAAGTCAGCTTATT 192
BSNT_02142 184 CAAACATTTCTAACCAAGGAGGTCATGTCATCATGA- 219
|||||||||.||.|||||||||||||| .||.|
BL03820 193 CAAACATTTTTAGCCAAGGAGGTCATG----AATTAA 225
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