Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02153 and BL03814

See DNA alignment / Visit BSNT_02153 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:39
# Commandline: needle
#    -asequence pep-align/BSNT_02153___xkdR.1.5803.seq
#    -bsequence pep-align/BL03814___xkdR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02153___xkdR-BL03814___xkdR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02153___xkdR-BL03814___xkdR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02153___xkdR
# 2: BL03814___xkdR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 102
# Identity:      47/102 (46.1%)
# Similarity:    73/102 (71.6%)
# Gaps:          14/102 (13.7%)
# Score: 241.0
# 
#
#=======================================

BSNT_02153___      1 MRLSEAIKHLAVGAVDAESPVELLPAEVVSVSPVEIKLKENSKLIIPEDA     50
                     |:||:|||.||:|||:|||||:::||||||.||:::||:.:.||:||.|.
BL03814___xkd      1 MKLSDAIKELALGAVNAESPVDVMPAEVVSASPLKLKLRNHDKLVIPSDL     50

BSNT_02153___     51 IIIPK-------RMQSGGDD-------ALEPGDRLMTAALTGGQSFFILD     86
                     :::.:       :::..|:|       .|..||.:|.||:.||||||::|
BL03814___xkd     51 LVVARHLTEHTEQIRIDGEDKTIRFYNQLHAGDHVMIAAMPGGQSFFVID    100

BSNT_02153___     87 KV     88
                     :|
BL03814___xkd    101 RV    102


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