Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02156 and BL03811
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:39
# Commandline: needle
# -asequence pep-align/BSNT_02156___xkdU.1.5803.seq
# -bsequence pep-align/BL03811___xkdU.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02156___xkdU-BL03811___xkdU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02156___xkdU-BL03811___xkdU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02156___xkdU
# 2: BL03811___xkdU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 318
# Identity: 101/318 (31.8%)
# Similarity: 133/318 (41.8%)
# Gaps: 138/318 (43.4%)
# Score: 497.5
#
#
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BSNT_02156___ 1 MSKQDDMRAYLPPFLTSLKEMAELLKAEAPEFDKQNDSIFDLTDQLFVPT 50
|||.|:|..:|||:|..::|:.|::.||||||::||..|||:||||||.|
BL03811___xkd 1 MSKIDEMAFHLPPYLMEIREIQEIITAEAPEFERQNQEIFDMTDQLFVTT 50
BSNT_02156___ 51 ATWGLSRWEKILNVPRESGDTDEIRRLRLISKMSNIPPITYRAIEQAVNR 100
|||||.||||||||.||:.|..:|||.||::|||||||||.|:||:|||.
BL03811___xkd 51 ATWGLDRWEKILNVRREASDGVDIRRARLLTKMSNIPPITSRSIERAVNA 100
BSNT_02156___ 101 FLKNPSAQVRLLPGEYRFNVDINVDDLQHMNELIEAIENMKPAHLAYTLR 150
|||.|||.|||..|.|.|.:.:|.:|||.:..:|:.:.:|||||||||.|
BL03811___xkd 101 FLKQPSASVRLTAGRYHFLLSVNGEDLQFIPSIIQTVNHMKPAHLAYTFR 150
BSNT_02156___ 151 GGLNETLQ----IKDTVILNHRRYRTASELKVGYSVTLNNNEVVLT---- 192
||.:...: :.|.::|.. |.|:..|: .|.|.
BL03811___xkd 151 GGFHYECRPPKSVHDRLVLRS---------KNGFFGTI---PVYLDGQYL 188
BSNT_02156___ 192 -------------------------------------------------- 192
BL03811___xkd 189 LDDAFYLNGFREIDGLPRRFKQQLTLRHKKRQYIRSASSFTIKTAAENRR 238
BSNT_02156___ 192 -------------------------------------------------- 192
BL03811___xkd 239 KQQTKAGMKTGITNQNKKVQSFKISCKCEHEFKQAGALEMREKWWTLNGA 288
BSNT_02156___ 192 ------------------ 192
BL03811___xkd 289 FLLDGTKQLAAAAQKIAL 306
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